Sequence detailsbmy_14608 (Coding sequence)

Part of scaffold_1023 (SequenceType object (1))

For more information consult the page for scaffold_1023 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SHANK3ENSTTRG00000014003 (Bottlenosed dolphin)

Gene Details

SH3 and multiple ankyrin repeat domains 3

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000013278, Bottlenosed dolphin)

Protein Percentage 88.14%
cDNA percentage 89.4%
Ka/Ks Ratio 0.36633 (Ka = 0.0855, Ks = 0.2333)

SHANK3ENSBTAG00000030180 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000040212, Cow)

Protein Percentage 92.46%
cDNA percentage 90.02%
Ka/Ks Ratio 0.10271 (Ka = 0.0441, Ks = 0.4297)

Additional orthologs identified in other species via the OPTIC pipeline.

SHANK3 (Human)   Shank3 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 5010 bp    Location:104295..63949   Strand:-
Raw sequence 
>bmy_14608
CCCCTTGCCACCCCCGCTTCCCTCGCCGCTCAGGCCCCCTCCCCCCGCCGCCCCCGCCCCCGGGGAAGGCAGGCGCCGAGCGGAGCCGGGGCCGATGCAGCTGAGCCGCGCGCCGCCGCCGCCGCCGCCGCCGCCGCCCCTGCGGAGCCCTCGGCGCCGCTGTCCCCCGTGCCGGCCCCGGCCCCCCCCGGCCCCCTCCCGCGCAGCGCGGCCGACGGGGCTCCGGTGGGGGGGCAGGGGGGGCCGGGGCGCCGCGAGGAGCCCCGGGGCGCCCAGCTCCCGGCCGCGAGCGGCCACGGCCGGGGCGCGGGGATGGACGGCCCCGGGGCCAGCGCCGTGATCGTGCGCGTCGGCATCCCGGACCTTCAGCAGACGAAGTGCCTGCGCCTGGACCCGGCCGCGCCGGTGTGGGCAGCCAAGCAGCGCGTGCTCTGCGCCCTCAACCACAGCCTCCAGGACGCGCTCAACTACGGGCTCTTTCAGCCGCCCTCCCGGGGCCGCGCGGGCAAGTTCCTGGACGAGGAGCGGCTCCTGCAGGAATACCCGCCCAACCTGGACACGCCCCTGCCCTACCTGGAGTTTCGATACAAGCGGCGAGTTTATGCCCAGAACCTCATTGATGATAAGCAGTTTGCAAAGCTTCACACAAAGGCGAACCTGAAGAAGTTTATGGAATACGTCCAGCTGCACAACACGGAAAAGGTGGCACGCCTGCTGGACAAGGGGCTGGACCCCAATTTCCACGATCCTGACTCAGGAGAGTGTCCTCTGAGCCTTGCGGCCCAGCTAGACGATGCCACAGACCTGCTGAAGGTGCTGAGGAACGGCGGCGCTCACCTGGACTTCCGCACCCGCGACGGGCTCACCGCCGTGCACTGTGCCGCGCGCCAGCGGAATGCGGCGGCCTTGACGACCCTGCTGGACCTGGGCGCTTCCCCTGACTACAAGGACAGCCGCGGCCTGACGCCCTTGTACCACAGCGCCCTGGGTGGGGGGGACGCCCTCTGCTGTGAGCTGCTCCTGCACGACCATGCTCAGCTGGGGACCAGCGACGAGAACGGCTGGCAGGAGGTCCACCAGGTGGGCGGGGAGCGTGAAGGCGGGGGTGTCCCCGGCTCCGCCTCTGGGGTTTGGGGCTTGGGCTCCGTCCAGGGGCCCAGCAGCACCTCTTCCCTCCCCCAGGCCTGCCGCTTTGGGCACGTGCAGCACCTGGAGCACCTGCTGTTCTACGGAGCCAACATGGGGGCCCAGAACGCCTCGGGGAACACAGCCCTGCACATCTGCGCCCTCTACAACCAGGAGAGCTGTGCCCGCGTCCTGCTTTTCCGTGGAGCCAGTAAGGATGTCCGCAATTATAACAGCCAGACAGCCTTCCAGGTGGCCATCATAGCAGGGAACTTTGAGCTTGCGGAGGTCATCAAGACTCACAAAGATTCGGATGTTGTGCTCAGCATTGGGGAGGGCGGTTTTTGGGAGGGGACCGTGAAAGGCCGCACGGGCTGGTTCCCGGCTGACTGCGTGGAGGAGGTGCAGATGAGACAGTATGACACGCGGCACGAAACCCGGGAGGACCGGACGAAGCGACTTTTCCGCCACTACACGGTGGGCTCCTATGACAGCCTCTCTGCACACAGCGATTATGTCATTGACGACAAGGTGGCTGTCCTGCAGAAACGGGACCACGAAGGCTTTGGTTTTGTGCTCCGGGGGGCCAAAGCAGAGACCCCCATCGAGGAGTTCACGCCCACGCCGGCCTTCCCGGCGCTTCAGTATCTCGAGTCGGTGGACGTGGAGGGCGTGGCCTGGAGGGCCGGGCTGCGCACGGGGGACTTCCTAATCGAGGTGAATGGAGTGAACGTGGTGAAGGTCGGGCACAAGCAGGTGGTGGCTCTGATCCGCCAGGGCGGGAACCGCCTCGTCATGAAGGTGGTGTCAGTGACAAGGAAGCCTGAAGAAGATGGGGCTCGGCGCAGAGCCCTCCTTCCCGACGCTGCCAGCAGCTGCCTGGAGGCCGGGGTTGCCATAGCAACTGTGAGGTTGACGCTGCCGCTGCCGCTTATTGTCGGAGGGAAGGGGGAGGCGGCACCTGAGGGAAGAGGAAAAGCGTCTTCTCCCCGCGCCAACGTCGCGGCACAGCTTGGGCCCAGGAGGCTTTGCTGGCCGGCCCCGCCGCCCCCTAAGAGGGCCCCCAGTACCACGCTGACCCTGCGCTCCAAGTCCATGACGGCGGAGCTTGAGGAGCTTGAGAAGCTGGACGAGATCCTGGCAGCCGCCACGGAGCCGGCGCTGAGGCCAGACATCGCGGATGCTGACTCGAGAGCTGCCACCGTCAAGCAGCGGCCCACCAGTCGCAGGATCACCCCTGCTGAGATCAGCTCCCTGTTTGAGCGCCAGGGCCTCCCAGGCCCAGAGAAGCTGCCAGGCTCCCTGCGGAAGGGGATTCCACGGACCAAGTCTGTAGGGGAAGATGAGAAGCTGGCGTCCTTGCTGGAGGGGCGCTTCCCGAGGAGCACGTCGATGCAGGATTCAGTGCGCGAGGGCCGAGGCATCCCGCCCCCGCCGCAGACCGCACCTCCGCCCCCGCCCGCACCCTACTACTTCGACTCCGGGCCGCCCCCCGCCTTCTCGCCGCCGCCTCCGCCGGGCCGCGCCTACGACACCGTGCGCTCCAGCTTCAAACCCGGCCTGGAGGCGCGCCTGGGTGCGGGCGCTCCGGGCCTGTATGATGCCAGCGTGGCCCTGGGGCCGCTGCCCTACCCGGAACGGCAGAAGCGCGCGCGCTCCATGATCATCCTTCAGGACTCGGCGCCCGAGGCAGGCGACGTCCCCCGGCCCCCGCCAGCGGCCACCCCGCCGGAGCGCCCGAAGCGTCGGCCGCGGCCGCCCGGCCCCGACAGCCCTTACGCCAACCTGGGCGCCTTCAGCGCCAGCCTCTTCGCGCCGTCCAAACCTCAGCGCCGCAAAAGCCCGCTGGTGAAGCAGCTGCAGGTGGAGGATGCGCAGGAGCGCGCGGCCCTGGCCGTGGGCAGCCCTGGCCCGGCGGGCGGCAGCTTCGCCCGGGAACCCTCCCCGACACACCGTGGGCCTCGGCCGAGCGGCCTCGACTACGGCCCCGGAGACGGGCCCGGGCTCGCGTTCGGCGGCGCGGCCCCAGGCAAGGACCGGCGGCTGGAGGAGCGGCGGCGCTCCACCGTCTTCCTGTCTGTGGGCGCCGTCGAGAGCAGCCCTCCCAGCGCAGACCTGCCCTCCCTGCAGCCCTCCCGCTCCATTGACGAGCGCCTGCTGGGGCCCGGCGCCACCACCGGCCGTGACCTGCTGCTGCCCTCCCCTGTCTCCGCTCTGAAGCCATTGGTCAGCGGCCCGAGCCTTGGGCCTTCGGGCTCCACCTTCATCCACCCGCTCACCGGCAAACCCCTGGACCCCAGCTCACCCCTGGCCCTCGCCCTGGCTGCCCGGGAGCGGGCTCTGGCCTCCCAGGCGCCCTCCCGTTCCCCCACACCTGTGCACAGCCCTGACACCGAGCGCCCTGGGCCCTTGTTTGTGGACGTGCAGGCTCGTGACACCGAGCGAGGGCCCCTGGCCTCCCCAGCCTTCTCCCCGAGGAGCCCAGCCTGGGTTCCTGTGCCTGCTCGCAGGGAAGCCGAGAAGGCCCCCCGGGAGGAGCGGAAGTCGCCGGAGGACAAGAAGTCCATGATCCTGAGCGTCCTGGACACATCCCTGCAGCGGCCAGCCGGCCTCATCGTCGTGCATGCCACCAGCAACGGGCAGGAGCCCAGCGGGCTGGGGGCCGAAGAGGAGCGCCCGGGCACCCCAGAGCTGGCCCCGGCCCCCACGCAGTCGGCTGTGGTGGCAGAGCCCCTGCCTAGCCCCCGGGCCCAGCCCCCGGGCAGTACCCCAGCAGACGCCGGGCTGGGCCAGGGCAGCTCAGAGGAGGAGCCAGAGCTGGTATTCGCCGTGAACCTGCCGCCGGCCCAGCTGTCCTCCAGCGATGAGGAGACCAGAGAGGAGCTGGCCCGCATCGGACTCGTGCCGCCTCCTGAAGAGTTTGCCAATGGGGTCCTGCTGGCCACCCCGCTCCCTGGCCCAGGTCCCTCGCCCGCCACGCTGCCAGGCCCGGCCTCAGGGAAGCCGAGCAGCGAGCCGCCCCCTGCCCCCGAGTCCGCAGCGGATTCGGGGGTGGAGGAGGCCGACACGCGCAGCTCCAGCGACCCGCACCTGGAGACCACGAGCACCATCTCCACAGTGTCCAGCATGTCCACCCTGAGCTCGGAGAGCGGGGAACTCACCGACACCCACACCTCCTTCGCCGATGGACATACTTTTCTACTCGAGAAGCCACCAGTGCCTCCCAAGCCCAAGCTCAAGTCCCCGCTGGGGAAGGGGCCGGTGACCTTCAGGGACCCGCTGCTGAAGCAGTCCTCGGACAGCGAGCTCATGGCCCAGCAGCATCATGCCGCCTCCGCCGGCTTGGCCTCTGCTGCCGGGCCTGCTCGCCCTCGCTACCTCTTCCAGAGAAGGTCCAAGCTGTGGGGGGACCCCGTGGAGAGCCGGGGGCTCCCCGGGCCCGAAGACGACAAACCAACTGTGATCAGTGAGCTCAGCTCCCGCCTGCAACAGCTGAACAAAGACACCCGCTCCCTGGGGGAGGAGCCAGTTGGCGGCCTGGGCGGCCTGCTGGACCCTGCCAAGAAGTCGCCCATCGCGGCAGCTCGGACCCACCACCAACTTCCTGTTTTCTGCCCCAGAAACATTTCTGTCTCTCAGCACCACCTCAGAGTCCCTCAAACACAGATCCCTGTGAGTGATTTTCAAAGCGCATCAAGAAGCCATTCTCAGGCGGAAATCATGCCGTTTCTCTGCACCTCCCTCTGCTGTCTCTTCTCCATACCTTACCCGTTCCTCTGTCCTCCCCGGCCACTTCCTACGCAAGGTGGGGACCTAAAGAGGCCACACGGTGCCCTGGAAATGGGGGGAGGCACTGGCTTGGGGGGAGGGGCCAAGCAGGGGGCT

Related Sequences

bmy_14608T0 SequenceType object (3)

Length: 1670 aa      View alignments
>bmy_14608T0
PLATPASLAAQAPSPRRPRPRGRQAPSGAGADAAEPRAAAAAAAAAPAEPSAPLSPVPAPAPPGPLPRSAADGAPVGGQGGPGRREEPRGAQLPAASGHGRGAGMDGPGASAVIVRVGIPDLQQTKCLRLDPAAPVWAAKQRVLCALNHSLQDALNYGLFQPPSRGRAGKFLDEERLLQEYPPNLDTPLPYLEFRYKRRVYAQNLIDDKQFAKLHTKANLKKFMEYVQLHNTEKVARLLDKGLDPNFHDPDSGECPLSLAAQLDDATDLLKVLRNGGAHLDFRTRDGLTAVHCAARQRNAAALTTLLDLGASPDYKDSRGLTPLYHSALGGGDALCCELLLHDHAQLGTSDENGWQEVHQVGGEREGGGVPGSASGVWGLGSVQGPSSTSSLPQACRFGHVQHLEHLLFYGANMGAQNASGNTALHICALYNQESCARVLLFRGASKDVRNYNSQTAFQVAIIAGNFELAEVIKTHKDSDVVLSIGEGGFWEGTVKGRTGWFPADCVEEVQMRQYDTRHETREDRTKRLFRHYTVGSYDSLSAHSDYVIDDKVAVLQKRDHEGFGFVLRGAKAETPIEEFTPTPAFPALQYLESVDVEGVAWRAGLRTGDFLIEVNGVNVVKVGHKQVVALIRQGGNRLVMKVVSVTRKPEEDGARRRALLPDAASSCLEAGVAIATVRLTLPLPLIVGGKGEAAPEGRGKASSPRANVAAQLGPRRLCWPAPPPPKRAPSTTLTLRSKSMTAELEELEKLDEILAAATEPALRPDIADADSRAATVKQRPTSRRITPAEISSLFERQGLPGPEKLPGSLRKGIPRTKSVGEDEKLASLLEGRFPRSTSMQDSVREGRGIPPPPQTAPPPPPAPYYFDSGPPPAFSPPPPPGRAYDTVRSSFKPGLEARLGAGAPGLYDASVALGPLPYPERQKRARSMIILQDSAPEAGDVPRPPPAATPPERPKRRPRPPGPDSPYANLGAFSASLFAPSKPQRRKSPLVKQLQVEDAQERAALAVGSPGPAGGSFAREPSPTHRGPRPSGLDYGPGDGPGLAFGGAAPGKDRRLEERRRSTVFLSVGAVESSPPSADLPSLQPSRSIDERLLGPGATTGRDLLLPSPVSALKPLVSGPSLGPSGSTFIHPLTGKPLDPSSPLALALAARERALASQAPSRSPTPVHSPDTERPGPLFVDVQARDTERGPLASPAFSPRSPAWVPVPARREAEKAPREERKSPEDKKSMILSVLDTSLQRPAGLIVVHATSNGQEPSGLGAEEERPGTPELAPAPTQSAVVAEPLPSPRAQPPGSTPADAGLGQGSSEEEPELVFAVNLPPAQLSSSDEETREELARIGLVPPPEEFANGVLLATPLPGPGPSPATLPGPASGKPSSEPPPAPESAADSGVEEADTRSSSDPHLETTSTISTVSSMSTLSSESGELTDTHTSFADGHTFLLEKPPVPPKPKLKSPLGKGPVTFRDPLLKQSSDSELMAQQHHAASAGLASAAGPARPRYLFQRRSKLWGDPVESRGLPGPEDDKPTVISELSSRLQQLNKDTRSLGEEPVGGLGGLLDPAKKSPIAAARTHHQLPVFCPRNISVSQHHLRVPQTQIPVSDFQSASRSHSQAEIMPFLCTSLCCLFSIPYPFLCPPRPLPTQGGDLKRPHGALEMGGGTGLGGGAKQGA