Part of scaffold_1023 (Scaffold)

For more information consult the page for scaffold_1023 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CPT1B ENSTTRG00000013980 (Bottlenosed dolphin)

Gene Details

carnitine palmitoyltransferase 1B (muscle)

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000013257, Bottlenosed dolphin)

Protein Percentage 89.04%
cDNA percentage 92.19%
Ka/Ks Ratio 0.43158 (Ka = 0.0679, Ks = 0.1573)

CPT1B ENSBTAG00000016048 (Cow)

Gene Details

Carnitine O-palmitoyltransferase 1, muscle isoform

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000021357, Cow)

Protein Percentage 85.87%
cDNA percentage 88.02%
Ka/Ks Ratio 0.21371 (Ka = 0.0838, Ks = 0.3923)

CPT1B  (Minke Whale)

Gene Details

carnitine palmitoyltransferase 1B (muscle)

External Links

Gene match (Identifier: BACU013520, Minke Whale)

Protein Percentage 93.97%
cDNA percentage 95.16%
Ka/Ks Ratio 0.4911 (Ka = 0.043, Ks = 0.0875)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 2214 bp    Location:168329..213585   Strand:+
>bmy_14611
ATGGCGGAAGCGCACCAGGCTGTGGCCTTCCAGTTCACGGTGACGCCAGAGGGGGTCGACTTCCGGCTCAGTCGGGAGGCCCTGAAACACATCTACCTGTCTGGCATCAACTCCTGGAAGAGACGCCTGATTCGCATCAAGAATGGCATCCTCAGGGGTGTGTACCCTGGCAGCCCCACCAGCTGGCTGGTCGTCGTCATGACAACACTGGGTTCCTCCTACTGCAACGTGGACATCTCCATGGGGCTTATCTGTTTTATCCAGAGATGGCTTCCTGAGGGATGTGGCCCCTACCGGACCCCACAGACCCGGACACTTCTCAGCGTGGCCATCTTCTCCACGGGGGTCTGGATGATGGGCATCCTCTTCTTCCGCCAAACCCTGAAACTGCTGCTTTCCTACCACGGTTGGATGTTTGAGATGCACGGCCAGACCAGCCACTTCACCAAAGTTTGGGCTATGTGTGTCCGCCTTCTGTCCGGCCGGCGGCCCATGCTCTACAGCTTCCAGACATCTCTGCCCAAGTTGCCCGTGCCCAGCGTGTCAGCCACAATTCATCGGTACCTAGAATCCGTGAAACACTTATTGGATGACAAGGAATATTACCGAATGGAGATGCTGGCCAAGGAATTCCAGGAGAAGACTGCCCCCAGGCTGCAGAAGTACCTGGTACTCAAGTCATGGTGGGCAACCAATTATGTGAGCGACTGGTGGGAAGAGTACGTCTACCTTAAAGGCAGGACGCCCCTCATGGTGAACAGCAACTATTATGTCATGGACTTAGTGCTTGTCAAGAACGCAGACGTGCAGGCAGCCCGCCTGGGAAACATTGTCCACGCCATGATCAAGTATCGCCATAAACTGGACCGTGAAGAGATCAAGCCTGTGATGGTGCTGGGCATCGTGCCCATGTGCTCCTACCAGATGGAGAGGATGTTCAACACCACTCGGATCCCGGGGAAGGACACAGATGTGCTACAGCACCTCACAGACAGCAGGCACGTAGCTGTCTACCACAAGGGCCGCTTCTTCAAGTTGTGGCTCTATGAGGGCTCCCGCCTGCTCAAGCCTCGGGACCTGGAGATGCAGTTCCAGAGGATCCTGGATGACCCCTCCCCGCCCCAGCCTGGGGAGGAGAAACTGGCGGCCCTCACCGCAGGGGGAAGAGCGGAGTGGGCTCAGGTACGCCAGGCCTTCTTCGGCTCCGGCAAGAACAAGGCTGCCCTGGATGCCATCGAGCGCGCTGCTTTCTTTGTGGCTCTGGATGAGGAGTCTCACCGCTATGACCCCGAAGACGAGGCCAGCCTCAGCCTCTACGGCAAGGCCCTGCTGCACGGCAGCTGCTACAACAGCTTCGACCTGGGCTACACAGAGACTGGGCACTGTCTGGGCAAACCCAACGCTGTGCTGGCCCCCCCCCAGCGGCTGCAGTGGGACATTCCTGAGCAGTGCCAGGCAGTCATCGAGAGCTCCTACCGGGTGGCCAAGGCGCTGGCTGACGACGTGGAATTGTACTGCTTCCAGTTCTTGCCCTTTGGCAAAGGSCTCATCAAGAAGTGCCGGACCAGCCCTGACGCCTTCGTGCAGATCGCCCTGCAGCTGGCACACTTCCGGGACAGAGGCAGGCTCTGCCTGACCTACGAAGCCTCGATGACCAGGATGTTCCGGGAGGGACGGACGGAGACCGTACGCTCCTGCACTTGCGAGTCCACAGCCTTCGTTCGGGCCATGGCGCAGGGGCGCCACCTGAAAGCAGACCTCCAAGATCTGTTCCGGAAAGCTGCTGAGAAGCACCAGAATATGTACCGCCTGGCCATGACGGGGGCTGGGATTGACAGGCACCTCTTCTGCCTTTACGTGGTCTCCAAGTACCTGGGGGTCAAGTCCCCTTTCCTGGCCGAGGTGCTCTCAGAACCCTGGCGCCTCTCCACCAGCCAGACTGCTCAATTCCAGATCCGCATGTTTGACCCAAACCAGTACCCCAATCACCTGGGCGCTGGCGGTGGCTTTGGCCCTGTAGCTAATGACGGCTACGGGGTTTCCTACATGATCGCGGTGCAGGCCACGTGGATGGCCTACGACATGGTGGTGATGCGCACCAACCCCACGCTGGCGGAGTCCATGCGGCGGCTGGAGGGCGCCTTCCTCAGCTGCAAGGAGGAGATGGAGAAGAATTGGCAGGAGCTGCTCGACGAGACCAAGCGAGCGCAGTAG

Related Sequences

bmy_14611T0 Protein

Length: 738 aa      View alignments
>bmy_14611T0
MAEAHQAVAFQFTVTPEGVDFRLSREALKHIYLSGINSWKRRLIRIKNGILRGVYPGSPTSWLVVVMTTLGSSYCNVDISMGLICFIQRWLPEGCGPYRTPQTRTLLSVAIFSTGVWMMGILFFRQTLKLLLSYHGWMFEMHGQTSHFTKVWAMCVRLLSGRRPMLYSFQTSLPKLPVPSVSATIHRYLESVKHLLDDKEYYRMEMLAKEFQEKTAPRLQKYLVLKSWWATNYVSDWWEEYVYLKGRTPLMVNSNYYVMDLVLVKNADVQAARLGNIVHAMIKYRHKLDREEIKPVMVLGIVPMCSYQMERMFNTTRIPGKDTDVLQHLTDSRHVAVYHKGRFFKLWLYEGSRLLKPRDLEMQFQRILDDPSPPQPGEEKLAALTAGGRAEWAQVRQAFFGSGKNKAALDAIERAAFFVALDEESHRYDPEDEASLSLYGKALLHGSCYNSFDLGYTETGHCLGKPNAVLAPPQRLQWDIPEQCQAVIESSYRVAKALADDVELYCFQFLPFGKGLIKKCRTSPDAFVQIALQLAHFRDRGRLCLTYEASMTRMFREGRTETVRSCTCESTAFVRAMAQGRHLKADLQDLFRKAAEKHQNMYRLAMTGAGIDRHLFCLYVVSKYLGVKSPFLAEVLSEPWRLSTSQTAQFQIRMFDPNQYPNHLGAGGGFGPVANDGYGVSYMIAVQATWMAYDMVVMRTNPTLAESMRRLEGAFLSCKEEMEKNWQELLDETKRAQ*