Part of scaffold_1023 (Scaffold)

For more information consult the page for scaffold_1023 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

NCAPH2 ENSTTRG00000013974 (Bottlenosed dolphin)

Gene Details

non-SMC condensin II complex, subunit H2

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000013252, Bottlenosed dolphin)

Protein Percentage 85.74%
cDNA percentage 88.85%
Ka/Ks Ratio 0.429 (Ka = 0.0626, Ks = 0.1459)

BT.21459 ENSBTAG00000012607 (Cow)

Gene Details

condensin-2 complex subunit H2

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000016741, Cow)

Protein Percentage 81.8%
cDNA percentage 85.54%
Ka/Ks Ratio 0.19055 (Ka = 0.0995, Ks = 0.5224)

NCAPH2  (Minke Whale)

Gene Details

non-SMC condensin II complex, subunit H2

External Links

Gene match (Identifier: BACU013515, Minke Whale)

Protein Percentage 97.73%
cDNA percentage 97.93%
Ka/Ks Ratio 0.24077 (Ka = 0.0122, Ks = 0.0506)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1842 bp    Location:247377..234080   Strand:-
>bmy_14614
ATGGAGGACGTGGAGGCGCGCTTCGCTCACCTCCTGCAGCCCATCCGCGACCTCACCAAGAACTGGGAGGTGGATGTGGCGGCCCAGCTGGGCGAATATCTTGAGGAGCTGGACCAGATCTGCATTTCTTTTGACGAAGGCAAAACCACAATGAACTTCATTGAGGCAGCACTGCTGATCCAGGGCTCCGCGTGTGTCTACAGTAAGAAGGTGGAATATCTCTACTCGCTGGTCTACCAGGCTCTTGAYTTCATCTCTGGCAAGAAGCGGGCCAAGCAGCTCTCCTGTGAGCGGGAAGACGGGCCCATTGGGGATGCCGGCTCCAGGGCCCCCCAGGAAGTGGAGTATGAGTTCCTGTCGTTGGATGACCTCTCTGATTCCCGTGCTAACGTGGATCTGAGGAGTGACCAGGCCCCCAGTGAGACCCTCATCGTCCCCCTCCTGCCCATGGCCCTGGTAGCCCCTGATGAGATGGAGAAGAATAGTAACCCCCTGTACAGCTGTCGGGGGGAGGTCCTGGCCAGCCGGAAGGATTTTAGGATGAATACGTGCACCCCCCACCCCAGAGGAGCCTTCATGTTGGAGCCGGTGGGCATGTCCCCCATGGGGGCACTGCTGCCGAGGAACCATAAGGAGGCCGGGAGGGCTGAGGAGCAGCCAATGGAAGTCTCTGYGTGCAGGAGTCCCGTCCCGGCGCTCAGCACCTCCCAGGAGCCAGGCACCACTCCAGAAGGCCCAGTGCCCGGAGGTGGGGGTGAGGAAGAGGATACAGAGGGGGCAGCAGAGCCCCCCGAGGCCTCAGCCCCTGAGGTCCCGATGGAGCCGCAGGAGCCCGGGAGCCCAGAGCAGAGTGCGGCCCAGCCCAGGAGGTGTGCACTACGGGAGCGAAGGGAGGCCCTGGAGCCTGCGTCCCGGCTGAAGGAGACCCCAGACCCCTGGCAGGGCCTGGACCCCTTCGACTCCCTGGACTCTAAGCCCTTCAGGAAAGGTAGGCCCTACTCCGTGCCCCCCTGTGTGGAGGAGGCTCCAGGACAGAAGCGTAAGAGGAAGGGTGCTGTGAAGCTGCAGGACTTCCATCAGTGGTACCTGGCTGCCTTCCTCTTGCAGATGCTGACCACGCTGACAGCAGGAGGCCCCGGCGAAAGGGCCCTTCCTTTGCAGGCGGCTGAGCGGTGGCGGCCGAGGGCTCAGGAGGAACCGTGGCCTGCGGAGGAGGACCGGCTGGAGGACTCCCTGGAGGACCTGGGAGCGGCAGCAGGCGACTTTCTAGAGCCCGAGGAGTACGCAGAGCCTGAGGGGGCCGAGCCCGGGGAAGACGCAGACCTGGAAGCGGAAGCCATGCCGGCGTCCCTAAGCTACGAGGAGCTGGTCCGGAGGAACGTGGAGCTCTTCATCGCCACCTCGCAGAAGTTCGTCCAGGAGACAGAGCTGAGCCAGCGCATCAGGGACTGGGAGGACGTCATCCAGCCCCTGCTCCAGGAGCAGGAGCAGCACGTGCCCTTTGACATCCACGCTTACGGGGACCAGGTAGTCTCAAGGTTCAGCCAACTCAACCAGTGGTGTCCCTTTGCGGAGTTGGTGGCTGGCCAGCCTGCCTTTGAGGTGTGTCGTTCCATGCTGGCCTCCCTGCAGCTGGTGAGTGGGCCTGGGAGCCTGGGAGGGAAGCGGTCCCTGGTCTCTGCTGACGAACTGTCTCTACAGGCTAATGACTACACAGTGGAGATCACCCAGCAGCCTGGGCTAGAGGCGGCGGTGGATACCATGTCCCTGAGACTGCTCACGTACCAGCGGGCCCACAAGCGCTTCCAGACCTATGCTGCCCCCTCCATGGTCCAGCCCTGA

Related Sequences

bmy_14614T0 Protein

Length: 614 aa      View alignments
>bmy_14614T0
MEDVEARFAHLLQPIRDLTKNWEVDVAAQLGEYLEELDQICISFDEGKTTMNFIEAALLIQGSACVYSKKVEYLYSLVYQALDFISGKKRAKQLSCEREDGPIGDAGSRAPQEVEYEFLSLDDLSDSRANVDLRSDQAPSETLIVPLLPMALVAPDEMEKNSNPLYSCRGEVLASRKDFRMNTCTPHPRGAFMLEPVGMSPMGALLPRNHKEAGRAEEQPMEVSXCRSPVPALSTSQEPGTTPEGPVPGGGGEEEDTEGAAEPPEASAPEVPMEPQEPGSPEQSAAQPRRCALRERREALEPASRLKETPDPWQGLDPFDSLDSKPFRKGRPYSVPPCVEEAPGQKRKRKGAVKLQDFHQWYLAAFLLQMLTTLTAGGPGERALPLQAAERWRPRAQEEPWPAEEDRLEDSLEDLGAAAGDFLEPEEYAEPEGAEPGEDADLEAEAMPASLSYEELVRRNVELFIATSQKFVQETELSQRIRDWEDVIQPLLQEQEQHVPFDIHAYGDQVVSRFSQLNQWCPFAELVAGQPAFEVCRSMLASLQLVSGPGSLGGKRSLVSADELSLQANDYTVEITQQPGLEAAVDTMSLRLLTYQRAHKRFQTYAAPSMVQP*