Part of scaffold_1023 (Scaffold)

For more information consult the page for scaffold_1023 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

HDAC10 ENSTTRG00000012295 (Bottlenosed dolphin)

Gene Details

histone deacetylase 10

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000011664, Bottlenosed dolphin)

Protein Percentage 91.65%
cDNA percentage 93.19%
Ka/Ks Ratio 0.43113 (Ka = 0.0546, Ks = 0.1266)

HDAC10 ENSBTAG00000011000 (Cow)

Gene Details

histone deacetylase 10

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000014602, Cow)

Protein Percentage 84.78%
cDNA percentage 86.17%
Ka/Ks Ratio 0.26472 (Ka = 0.0975, Ks = 0.3681)

HDAC10  (Minke Whale)

Gene Details

histone deacetylase 10

External Links

Gene match (Identifier: BACU019929, Minke Whale)

Protein Percentage 93.83%
cDNA percentage 94.99%
Ka/Ks Ratio 0.45097 (Ka = 0.0402, Ks = 0.0893)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 2208 bp    Location:462636..468656   Strand:+
>bmy_14625
ATGGGGACCGCACTTGTGTACCACGAGGACATGACAGCTGCCCGGCTGCTCTGGGACGACCCCGAGTGCGAGATCGAGTGCCCGGAGCGCCTGACCACAGCCCTGGAGCGCCTGCAGCAGCGTGGCCTGGAGCAAAGGTGTCTGCGGCTGGCAGCCCGGGAGGCCTCGGAGGCCGAACTGGGCCTGGTGCACAGCCCGGAGTATGTGGCCCTGCTGCAGGGGACCCAGGCCTTGGGCACCGAGGAGCTCCAGACCCTGTCTGGACAGTACGATGCCGTCTACTTCCACCCGAGTACCTTCCACTGTGCCCGGCTGGCCGCGGGGGCGGCGCTGCAGCTGGTGGATGCAGTGCTGGCGGGAGCTGTGCGCAACGGGCTCGCCCTGGTGAGGCCTCCTGGGCACCACAGCCAGAGGGCTGCCGCCAATGGATTCTGCGTGTTCAACAACGTGGCCATAGCGGCCAAACATGCCCAGCGGCAGCACGGGCTGCACAGGATCCTCATCGTTGACTGGGATGTCCACCATGGCCAGGGCATCCAGTATATCTTTGAGGATGACCCCAGTGTCCTTTATTTCTCCTGGCACCGCTATGAGCACGGGCGCTTCTGGCCCTATCTCCGAGAGTCAGATGCAGACGCTGTTGGGCAGGGCCCGGGCCTTGGCTTCACTGTCAACCTGCCCTGGAACCAGGTCGGGATGGGAAATGCTGACTACGTGGCCGCCTTCCTGCATGTGCTGCTGCCCGTGGCCTTTGAGTTCGACCCTGAGCTGGTCCTAGTCTCCGCGGGATTTGACTCAGCCATCGGGGATCCCGAGGGGCAGATGCAGGCCACGCCAGAGTGCTTTGCCCACCTCACACAGCTGCTGCAGGTGCTGGCTGGTGGCCGAGTCTGCGCTGTGCTGGAGGTGATTGTGGCGAGCTGGGAGGGGTGGCTACCACCTGGAGTCACTCTCGCAGTCCGTGTGCATGATGGTGCAAGCGCTGCTGGGCGACCCTGCCCCGCCCCTGTTGGGGCCCATGGTGCCGCATGCCAGGTGCGAGGGGCAGGACGGAGGAGGGTGGGAAGGGCCAGGGGTGGGAGGCCAGGCCTCACTGATCCTGCTTCTCCTCGCAGCGCCCTGGAGTCCATCCAGAGTGTCCGGGTAGCCCAGGCCCCTCACTGGATGAGCCTCCAGCAGCAAGGTCAGCGTGGCCTGGGTCGGGATGGTGCCTCAGGCTCTCATGCAGTGGCTGTGACACTGAACCAACCCCTAGGTGTGGCCCCTGTACTGAGTCCCAGCCCCCGCTTCCCAGAGGGGAGGCCCTCGCCTCTGCTGCTGCCCCGGGGACCTGAATTCAAGGCAGCAGCGACCCAGGACGTGGCTGCCCTGAGCTCCCTCCTGGACCAGATGCGCCTCAATCCCACGCCCCCTGTACGCACAGCTGTTGCCTTGACTGCGCCAGATGCTGCTCTGGCCCTGCCCTCTGATGTCCTCTGTGAGGAGGGGTCAGCCCCACAGGAGGAGACGCAGGCCTGGGCCAGGCCACATGAGGCCCTGGCCCAGGACAGGGCCCTCACTGCACTCGGGAAGGTCCTGTACCTCTTGGACAGGATCCTGGATGGGCAGGTGAGCACTGGCATTGCAGTCACCCCAGCCTCTGCTGCAGCTGCCACCCTGGATGTGGCCATTCGGTGTGGCCTGTCCCACGGAGCCCAGAGGCTGCTTTGTCTGGCTGTGGGACAGCTGGATCGGCCCCCAGATCTCACGGATGATGGGAGGAATCTATGGCTGAATATTGGGGGCAAGGAGGCAGCTGCCCTGTCCATGTTCCACGTCTCTGTGCCACTGCCAGGGACGACTGGAGGGTTTCTGAGCTGTGTCCTGGCCCTGGTGCTGCCCCTGGCCTACAGCTTCCAGCCTAACCTGGTGCTGGTGGTGCTGGGGCCCGCCCATGGCCTGCGGGATCCCCAAGCTGCACTCCTGGCTGCGCTGCTTCGGGGCCCAGCAGGGGGCCGAGTCTTGGCCCTTGTGGATGAGGAATCCACACCCCAGCTTGCGGTGGTCCTGGCCAGGGTGTTGCATGGAGAGGCAGCCCCTAGCCTGGGTCCCTTCTCCATGGCCTCCCCAGAGGAAATGCAGGCCCTGATGCAGCTGAGAGGGCAGCTGGAGCCACGGTGGAAGATGCTGCAGGTGGCCAGTGAGGCTGGGGGGCCAGGCTCAGGCTGA

Related Sequences

bmy_14625T0 Protein

Length: 736 aa      View alignments
>bmy_14625T0
MGTALVYHEDMTAARLLWDDPECEIECPERLTTALERLQQRGLEQRCLRLAAREASEAELGLVHSPEYVALLQGTQALGTEELQTLSGQYDAVYFHPSTFHCARLAAGAALQLVDAVLAGAVRNGLALVRPPGHHSQRAAANGFCVFNNVAIAAKHAQRQHGLHRILIVDWDVHHGQGIQYIFEDDPSVLYFSWHRYEHGRFWPYLRESDADAVGQGPGLGFTVNLPWNQVGMGNADYVAAFLHVLLPVAFEFDPELVLVSAGFDSAIGDPEGQMQATPECFAHLTQLLQVLAGGRVCAVLEVIVASWEGWLPPGVTLAVRVHDGASAAGRPCPAPVGAHGAACQVRGAGRRRVGRARGGRPGLTDPASPRSALESIQSVRVAQAPHWMSLQQQGQRGLGRDGASGSHAVAVTLNQPLGVAPVLSPSPRFPEGRPSPLLLPRGPEFKAAATQDVAALSSLLDQMRLNPTPPVRTAVALTAPDAALALPSDVLCEEGSAPQEETQAWARPHEALAQDRALTALGKVLYLLDRILDGQVSTGIAVTPASAAAATLDVAIRCGLSHGAQRLLCLAVGQLDRPPDLTDDGRNLWLNIGGKEAAALSMFHVSVPLPGTTGGFLSCVLALVLPLAYSFQPNLVLVVLGPAHGLRDPQAALLAALLRGPAGGRVLALVDEESTPQLAVVLARVLHGEAAPSLGPFSMASPEEMQALMQLRGQLEPRWKMLQVASEAGGPGSG*