Part of scaffold_1023 (Scaffold)

For more information consult the page for scaffold_1023 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TUBGCP6 ENSTTRG00000012294 (Bottlenosed dolphin)

Gene Details

tubulin, gamma complex associated protein 6

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000011663, Bottlenosed dolphin)

Protein Percentage 86.56%
cDNA percentage 87.35%
Ka/Ks Ratio 0.15891 (Ka = 0.019, Ks = 0.1199)

TUBGCP6 ENSBTAG00000000650 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000000853, Cow)

Protein Percentage 87.31%
cDNA percentage 89.5%
Ka/Ks Ratio 0.15678 (Ka = 0.0617, Ks = 0.3938)

TUBGCP6  (Minke Whale)

Gene Details

tubulin, gamma complex associated protein 6

External Links

Gene match (Identifier: BACU013506, Minke Whale)

Protein Percentage 92.38%
cDNA percentage 94.21%
Ka/Ks Ratio 0.34262 (Ka = 0.0451, Ks = 0.1315)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 4266 bp    Location:468883..489495   Strand:+
>bmy_14626
ATGGCCAGCGTCCCCCAGCTGGTGGACGACCTGTGCGAGGCCCTCCTGCCGGCCGCGAAGGCTCACTATGGCCAGCGCCGCGGGAGCCGCAAGAAGGCCAAGCAGAGCCTCARGAGGGTGGCCTACAACGTTCTGTTCACGAGCCTCTTTCAAGATGAGACCCGCAAGCTGCAGCCCGGCTTCCCGAGACTCCCGGTGAAAAACAGGATCCTCATGCTGTCCTTCGACTTGCGAGTGAGCGGCCTGGGCGCTGAGGCCGACCGCCTGGAGGAGTTGGTGGAGGAGCTGGAGGCCGCGCATCGCCGGCCGCTGGCGGAGCTGGGATCCGTGCTGGACCTGCTGGTGCGGCTGGCGGGCAGCGGGCCCCCGCGCATGCTGCGGCGCCGGCGGGACTTCTTCCTGCACAGCCGGCCCGTCGGGAGAGACGTTCCCTACGGCGGCTACGACTGCGCCGACCTGAGCGGGTTGGAGGCGGACGTGCGGTCGCTCATCTCCGGAGAGGAGTATCTCTGTCGGGACCTGGTCCGGAAGACGCTGCAGGTGATGGAGGCGGCGCCGGGCACCGGCCTGCCCGCTGTCGGGCTCTTCTCGTATGGCGACCCCTGCGGGGACAGGTTTGAGAGGGACACCCGTGTCTCGCTCTTCGGAGCCCTGGTGCACAGCCGCACGGCCGACCTGGACGTCCGCCTGGACCTGCCCCCGGTGCCGGACAGCGCAGACCTCTCCGGACTGGCCATCAAGGTCCCTTCGAGCGTGGATCAGTCGGAAGATGAAGGGTTCCAATCAGCATCCAATCTGACTCCTGATTCCCAGTCTGAGCCGGGCGTGACTCCAGACATTGACCTGTGGGACGCTGTACTCACCTACGAGGCCAGCAAGCGGAGCCCGCCTGGCCACCGAGAGGAGCCCTACCTCACCGAGGCCGGAAGGGCCGCCTTCGACAGGTCCTGCCGGCTCTGCCAAGCGGGGCTGCAGGTGCTGGGCGGGGGCCTCCTGCAGGCCCCGCAGCCCGTCCTGGTGAAGGAGTGCGAGCTGGTGAAGGACGCGCTCAACATCCTGATTGGGGTCGTGTCCGCCACGTTTTCCCTCTGCCAGCCAGCTCCAGCCTTCACGGTGAAGCAGGGCGTCCACGTCTCGGGAGCGTCCCCCGAGAGCGTCAGCGGCCTCCTCTCGGAGGTGGCCGAGTGCGGGACCCACTACGCGCGCCTGAGCCACTTCTCTCTGCAGCCTGTGCTGGACACCTCGTGCAGCGAGGGCCTCGTGTTCCAGGGGGTGAAGCTGCTCTCCTACCTCTACCAGGAGGCCCTGGACAACTGCAGCAACGAGCACTACCCAGTCCTGCTGTCTCTGCTGAAGACCAGCTGCGAGCCCTACACGCGGTTCATCCACGACTGGGTGTACAGTGGGGTCTTCAGAGATGTTTACGGCGAGTTCATGATCCAGGTGAACCATGAGTACTTGGGCTTCAGAGATAAGTTTTACTGGACCCACGGCTAYGTGCTCATCTCCAAAGAGGTGGAGGACTGCGTCCCCGTGTTCCTGAGGCACGTTGCCCACGACGTGTACGTCTGCGGGAAGACCATCAACCTGCTGAAGCTCTGCTGCCCCCGGGTCCTCCCTCCTCGGCAGCATTACCTCTGCTGCTCCGATGTCCCGGTTCCTCGCATCTCGGTGATATTCTCCCTCGAGGAGCTGAAGGACATCGAGAAGGACTGTGCCATCTACGTGGGCCGGATGGAGAGGGTGGCGCGCCACAGCTCCATCAGCAAGGAGGAGAAGGAATTACGAATGGAAATTGCAAAACAAGAATTAATTGTCCAGGCCCGGGAAGCTGCGTCCAGGGTCCTGAGCGCGCTCAGCGATCGGCAGCTGTCTGAGCGGATGGCCTTGGATGCCCAGAAGCGAGAGCAGTTTCAGAGGCTGAAGGAGCAGTTTGTGAAGGACCGGGAGCGCCGCCGGGCGGCCAGGCAGGAGGAACTGGATGATGACTTCAGCTACGCCCGCGAGCTCCGGGACCGGCAGAGGAGGCTGAAGGCCCTGGAGGAGCAGCTGGAGAGGAAGGCCAGGCAGGCCCTGGTGGATCGGTACAGCCAGCTGTCCGCAGAGGCAGCTCGTCGGGAGCAGAGGGCGCTGTGGAAGGTCCGGAGGCACAGATTGGCCGGCGCTCGGCTTCGTTTTCTCTTAGAAGATCAGACACGCGTTCAGGCGCGGGCGGTGGGGCTGTGGCTTCCACCCCAACGGCTGCCGCCGCACATCCTGCTGGTTGAATTTCAGGAGCTGCTGGAAGACATGGCTGAGGGGAAGCCCCTGGAGCCGCTGGCCGTCCTCCCGGGTGCCTGCTCCCAGGCTTCCTTTCTGGGCCCTGAGCGCCCAGACGGAGGCGGCAGCTGCGATTCTGGGCGTGAGGAGCAGCACGGGGCCGCCCGGGACAGCCCTGACAGGCAGAGCGTGCTGACGCCGCAGCCCCTCGAGTCTCCAGCAGCGGGGGCCTGCGGCTCAGGGCCAGGTGCGGGCCCGCCGTCAGAGCAGGCGGAGGAGCCGGGGCCCTTCTCTGTGGGCCTCAGCATCCAAGACTTCCTGCCCGCGGCCCAGGGGGCTGAGCAGCCTGTGCTCACCAGCGCGGCCCCCGTCCTGGACGAGGCGCTGCAGACCATCGGCTCGGACCTGCCTCCCCTGGCTCCGTCCGCAGCAGCAGACACGGGGCCCTCCAGGCCACAGGAGTACGATTTCAGAACCATCCTGAGGCCGGCTGTGGCCGCCCCAGCTTCCCCAGGGGCCCTCCAGACTGCAGGAGGAAGCTTGGGCAGTGAGGGGCAGCAGCTGCGGGAGGACACTCACGTGCAGCCGGACACGTGTGTCCCAGATGGGTGGGTGGCTCTGCCTCACGCGCACCCCCCCCAGCACCCCTCCCGCCAGGAGGAGAGCAGCCAGGCCACGGGGCAGCTCTGTGGGCAAGTGGCAGAGCCTGGTGTTCCCACAGAGGGTTATGCTTCTGGAATGGCTCTCTCCCGGCCACGGTGGAACGTCCACGGACACGTGTCTGATGCCAGCATCAGGGTGGGGGAGAACGTGTGGGATGTGGCCCCCTCCCGGCCACGGTGGAATGTCCACGGACACGTGTCTCAGTCCAGTGTGATGCTGGGGGTGCTCTCAGGGGAAGCCGAGCCCAACGTGCCTGGGCCCCCCTGGGCGCCCCCTGACCATGGGTCCCAGTCAGGCCTCAGCTTGGGAGCCCAGAGCCCTGCCCGGGAACAGGAGCCACGGCTGCCTGCAGAGACGGCCTCAGGCGGCTCCGGTGCACAAGTGGCTGGACCTGGCTCTGGCCGTGGGGAGGAGAGCGGCCTGCAGGCCTTGCTGTCTGCGGAGGCTGCACCCACTGCTCTGGAAGACGGTATCCCTGAGGAGCCAGCAGAGCCTCCCGTCGCCCGCCTCCTGCACCACGGGCTTCCCCGAGCTTTCGCCCTCCCCGAGGACGCCGGGGCCCGGTCAGACGCGGACGAGAGCGCGGTGCAGCTGAGCGAGCTGCTGCCACTGCCTGTGCTCATGAAGCACTCCATCACGGCCCCGCTGGCTGCCCACGTCTCCCTGGTGAACAAGGCCGCGGTCGACTACTTCTTCGTGGAGCTGCACCTCGGGGCGCACTTCGAGGCGCTGCGGCACTTCCTGCTGATGGAGGACGGGGAGTTTGCGCAGTCCCTCAGCGACCTGCTCTTTGAGAAGCTCGGGGCGGGACAGACGCCTGGGGAGCTCCTCAGCCCGCTGGTGCTCAACTCCGTGCTGAGCAAGGCCCTGCAGTACAGCCTGCACGGCGACACCCCGCACGCCGCCAACCTCTCCTTCGCCCTCAAGTTCCTGCCCGAGACGTTTGCCCCCAATGCCCCGGACGTGCTGAGCTGCCTGGAGCTCAGGTACAAGGTTGACTGGCCCCTCAACATCGTGGTCACCGAGGGCTGCTTGAGCAGGTACAGCGGCATTTTCTCCTTCCTGTTGCAGTTGAAGCTCATGATGTGGACACTCAAGGATGTCTGCTTCCACCTCAAGCGCACAGCACGGGTGAGCCACGCGGCCGGCTCGGTGCAGTTCCGCCAGCTGCAGCTGTTCAAGCACGAGATGCAGCACTTTGTGAAGGTCATCCAGGGCTACATCGCCAACCAGATCCTGCACGTCACCTGGTGTGAGTTCCAGGCCAGGCTGGCCTCGGTGGGCGACCTAGAGGAGATCCAGCGTGCCCACGCCGAGTACCTGCACAAGGCTGTCTTCAGGTGA

Related Sequences

bmy_14626T0 Protein

Length: 1422 aa      View alignments
>bmy_14626T0
MASVPQLVDDLCEALLPAAKAHYGQRRGSRKKAKQSLXRVAYNVLFTSLFQDETRKLQPGFPRLPVKNRILMLSFDLRVSGLGAEADRLEELVEELEAAHRRPLAELGSVLDLLVRLAGSGPPRMLRRRRDFFLHSRPVGRDVPYGGYDCADLSGLEADVRSLISGEEYLCRDLVRKTLQVMEAAPGTGLPAVGLFSYGDPCGDRFERDTRVSLFGALVHSRTADLDVRLDLPPVPDSADLSGLAIKVPSSVDQSEDEGFQSASNLTPDSQSEPGVTPDIDLWDAVLTYEASKRSPPGHREEPYLTEAGRAAFDRSCRLCQAGLQVLGGGLLQAPQPVLVKECELVKDALNILIGVVSATFSLCQPAPAFTVKQGVHVSGASPESVSGLLSEVAECGTHYARLSHFSLQPVLDTSCSEGLVFQGVKLLSYLYQEALDNCSNEHYPVLLSLLKTSCEPYTRFIHDWVYSGVFRDVYGEFMIQVNHEYLGFRDKFYWTHGYVLISKEVEDCVPVFLRHVAHDVYVCGKTINLLKLCCPRVLPPRQHYLCCSDVPVPRISVIFSLEELKDIEKDCAIYVGRMERVARHSSISKEEKELRMEIAKQELIVQAREAASRVLSALSDRQLSERMALDAQKREQFQRLKEQFVKDRERRRAARQEELDDDFSYARELRDRQRRLKALEEQLERKARQALVDRYSQLSAEAARREQRALWKVRRHRLAGARLRFLLEDQTRVQARAVGLWLPPQRLPPHILLVEFQELLEDMAEGKPLEPLAVLPGACSQASFLGPERPDGGGSCDSGREEQHGAARDSPDRQSVLTPQPLESPAAGACGSGPGAGPPSEQAEEPGPFSVGLSIQDFLPAAQGAEQPVLTSAAPVLDEALQTIGSDLPPLAPSAAADTGPSRPQEYDFRTILRPAVAAPASPGALQTAGGSLGSEGQQLREDTHVQPDTCVPDGWVALPHAHPPQHPSRQEESSQATGQLCGQVAEPGVPTEGYASGMALSRPRWNVHGHVSDASIRVGENVWDVAPSRPRWNVHGHVSQSSVMLGVLSGEAEPNVPGPPWAPPDHGSQSGLSLGAQSPAREQEPRLPAETASGGSGAQVAGPGSGRGEESGLQALLSAEAAPTALEDGIPEEPAEPPVARLLHHGLPRAFALPEDAGARSDADESAVQLSELLPLPVLMKHSITAPLAAHVSLVNKAAVDYFFVELHLGAHFEALRHFLLMEDGEFAQSLSDLLFEKLGAGQTPGELLSPLVLNSVLSKALQYSLHGDTPHAANLSFALKFLPETFAPNAPDVLSCLELRYKVDWPLNIVVTEGCLSRYSGIFSFLLQLKLMMWTLKDVCFHLKRTARVSHAAGSVQFRQLQLFKHEMQHFVKVIQGYIANQILHVTWCEFQARLASVGDLEEIQRAHAEYLHKAVFR*