Part of scaffold_1020 (SequenceType object (1))

For more information consult the page for scaffold_1020 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

BRF2ENSTTRG00000016942 (Bottlenosed dolphin)

Gene Details

BRF2, RNA polymerase III transcription initiation factor 50 kDa subunit

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000016063, Bottlenosed dolphin)

Protein Percentage 97.72%
cDNA percentage 97.82%
Ka/Ks Ratio 0.21682 (Ka = 0.0108, Ks = 0.0499)

BRF2ENSBTAG00000027665 (Cow)

Gene Details

Transcription factor IIIB 50 kDa subunit

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000039624, Cow)

Protein Percentage 92.82%
cDNA percentage 91.76%
Ka/Ks Ratio 0.17417 (Ka = 0.0422, Ks = 0.2422)

BRF2 (Minke Whale)

Gene Details

BRF2, RNA polymerase III transcription initiation factor 50 kDa subunit

External Links

Gene match (Identifier: BACU003049, Minke Whale)

Protein Percentage 94.3%
cDNA percentage 94.49%
Ka/Ks Ratio 0.32689 (Ka = 0.0384, Ks = 0.1174)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence SequenceType object (2)

Length: 1056 bp    Location:150652..155454   Strand:+
>bmy_14642
ATGCCGGGCGGAGGCCGGTGTCCCGATTGCGGCTCCACTGAGCTCGTGGAAGACTCGCACTATTCGCAGAACCAGCTGGTGTGCTCCGACTGCGGCTGTGTGGTCACCGAGGGAGTCCTTACTACCACCTTCACTGACGAGGGCAACCTCCGAGAAGTAACATATTCCCGAAGCACAGGGGAAAACGAACAAGTTAGTCGCAGCCAGCAACGAGATTTGGATATGTTTTCTGGCACCTACATGCAGATGGTGAAGCTCCTGGGGCTGGATGTGCCATCTCTGTGCTTGGTGGACCTGGTGAAGACCTACTGTAGCAGCTTCAAACTGTTTGAAGCCTCCCCGTCTGTGCCAGCCAAGTACGTGGAAGACAAGGAGAAGATGCTGTCGCGAACGCTGCAGTTGGTGGAGCTGGCAGATGAGACGTGGCTGGTGACTGGGCGGCATCCCTTGCCTGTCATCACCGCCGCCACTTTCCTGGCTTGGCAGTCGCTGCGGCCTTCAGATCGGCTRACGTGTTCCCTTGCCCGGTTTTGTAAATTGGCGAACGTGGACCTGCCCTACCCCGCTTCCTCCCGCTTGCAGGAGCTGCTGGCTGTGCTGCTGCGGCTGGCCGAGCAGCTGGCCTGGTTGCAGGTCCTGAAGCTTGACAAGCGGTCTGTGGTCGCGCACATCGGCGACCTTCTCCAGCACCGCCACATGTTGGTCCGCAAGGCCTTTCGAGACGGAACAGCAGAGCCAGGCGCGCTGGACGCCCGGGAGAAGGAGCTGCAGGGGCCGGGGCAGGGGCAAGGATGGGGAAAAGAGGACCGGGGCCATGGCTCCTTAGATTTGCCTGCAGGGAAGCGGCCAGCGAGCCCCGCCCTCCTCCTTCCACCCTGCATGTTGAAGCCCCCAAAGCGGATCTGTCCCACACCCCCTGTCTCCACAGTCACTGGAGATGAGAACATTTCTGATAGTGAGATCGAGCAGTATTTGCGTACCCCTCAGGAAGTTAGGGACTTCCAGAGAGCTCAGGCCGCTAGACAGGCTGCCACGAGTGTTCCTAACCCTCCCTGA

Related Sequences

bmy_14642T0 SequenceType object (3)

Length: 352 aa      View alignments
>bmy_14642T0
MPGGGRCPDCGSTELVEDSHYSQNQLVCSDCGCVVTEGVLTTTFTDEGNLREVTYSRSTGENEQVSRSQQRDLDMFSGTYMQMVKLLGLDVPSLCLVDLVKTYCSSFKLFEASPSVPAKYVEDKEKMLSRTLQLVELADETWLVTGRHPLPVITAATFLAWQSLRPSDRLTCSLARFCKLANVDLPYPASSRLQELLAVLLRLAEQLAWLQVLKLDKRSVVAHIGDLLQHRHMLVRKAFRDGTAEPGALDAREKELQGPGQGQGWGKEDRGHGSLDLPAGKRPASPALLLPPCMLKPPKRICPTPPVSTVTGDENISDSEIEQYLRTPQEVRDFQRAQAARQAATSVPNPP*