Sequence detailsbmy_14669 (Coding sequence)

Part of scaffold_1024 (SequenceType object (1))

For more information consult the page for scaffold_1024 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

NFKBIAENSTTRG00000007970 (Bottlenosed dolphin)

Gene Details

nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000007542, Bottlenosed dolphin)

Protein Percentage 99.04%
cDNA percentage 98.09%
Ka/Ks Ratio 0.05495 (Ka = 0.0042, Ks = 0.0767)

BIKBAENSBTAG00000016683 (Cow)

Gene Details

NF-kappa-B inhibitor alpha

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000022183, Cow)

Protein Percentage 98.41%
cDNA percentage 94.9%
Ka/Ks Ratio 0.02476 (Ka = 0.0068, Ks = 0.2751)

NFKBIA (Minke Whale)

Gene Details

nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha

External Links

Gene match (Identifier: BACU008718, Minke Whale)

Protein Percentage 98.66%
cDNA percentage 98.81%
Ka/Ks Ratio 0.21537 (Ka = 0.0063, Ks = 0.0291)

Additional orthologs identified in other species via the OPTIC pipeline.

NFKBIA (Human)   Nfkbia (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1212 bp    Location:71112..77059   Strand:+
Raw sequence 
>bmy_14669
ATGCCTGCAGTCACACCAGGCCTTGATGGTGCTCCTTTTCCCACAGGGGTGCTCCTGCCCCCACTGAAGCAGGCGAACATCACTGGCCATCCTGTTCTTCCCTATGGCTGTATCCTGTGCAGCTGCAAGGGCGCCGCGGCGGCGCTGCAGAGCCCACAACAGTCCGAACCCGCCGTCCCGTCGGTCCGCGACACCGCGAGCAGCCAGCGCGCCGCGCAGCCCTTGGCCCGCGCACCTGGGGAGCAGCGCCCGAGCCCTCACCGCGCCATGTTCCAGCCCGCGGAGCCCGGCCAGGAGTGGGCCATGGAGGGCCCCCGGGACGCGCTCAAGAAGGAGCGGCTGCTGGACGACCGCCACGACAGCGGCCTGGACTCCATGAAGGACGAGGAGTACGAGCAGATGGTGAAAGAGCTGCGGGAGATCCGCCTCGAGCCTCAGGAGGCGCCGCGCGGCGCCGAGCCTTGGAAGCAGCAGCTCACCGAGGACGGAGACTCGTTCCTGCACTTGGCCATCATCCATGAAGAGAAGGTGCTGACCATGGAAGTGGTCCGCCAAGTGAAGGGAGACCTGGCGTTCCTCAACTTCCAGAACAACCTGCAGCAGACTCCTCTCCACTTGGCGGTGATCACCAACCAGCCAGAAATCGCTGAGGCACTTCTGGAAGCTGGCTGTGATCCTGAGCTCCGAGACTTTCGAGGAAATACCCCCCTACACCTTGCCTGTGAGCAGGGCTGCCTGGCCAGTGTGGGAGTCCTGACTCAGCCCCGCGGGACCCAGCACCTCCACTCCGTCCTGCAAGCCACCAACTACAATGGTCACACGTGTCTGCACTTGGCCTCTATTCATGGCTACCTGGGCATCGTGGAGCTGTTGGTGTCCTTGGGTGCTGATGTCAACGCACAGGAGCCCTGCAATGGCCGAACTGCCCTCCATCTCGCGGTTGACCTGCAGAATTCCGACCTGGTGTCGCTCTTGTTGAAGTGTGGGGCCGACGTCAACAGGGTCACCTACCAGGGCTACTCCCCGTACCAGCTTACCTGGGGCCGGCCAAGCACCCGGATACAGCAGCAGCTGGGCCAGCTGACCCTGGAGAACCTTCAGATGCTGCCCGAGAGCGAGGATGAGGAGAGCTATGACACGGAGTCAGAGTTCACAGAGGATGAGCTGCCCTATGATGACTGTGTGCTTGGAGGCCAGCGCCTGACGTTATGA

Related Sequences

bmy_14669T0 SequenceType object (3)

Length: 404 aa      View alignments
>bmy_14669T0
MPAVTPGLDGAPFPTGVLLPPLKQANITGHPVLPYGCILCSCKGAAAALQSPQQSEPAVPSVRDTASSQRAAQPLARAPGEQRPSPHRAMFQPAEPGQEWAMEGPRDALKKERLLDDRHDSGLDSMKDEEYEQMVKELREIRLEPQEAPRGAEPWKQQLTEDGDSFLHLAIIHEEKVLTMEVVRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLEAGCDPELRDFRGNTPLHLACEQGCLASVGVLTQPRGTQHLHSVLQATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNSDLVSLLLKCGADVNRVTYQGYSPYQLTWGRPSTRIQQQLGQLTLENLQMLPESEDEESYDTESEFTEDELPYDDCVLGGQRLTL*