Part of scaffold_1024 (Scaffold)

For more information consult the page for scaffold_1024 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PSMA6 ENSTTRG00000007968 (Bottlenosed dolphin)

Gene Details

proteasome (prosome, macropain) subunit, alpha type, 6

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000007541, Bottlenosed dolphin)

Protein Percentage 74.54%
cDNA percentage 76.7%
Ka/Ks Ratio 0.53276 (Ka = 0.0947, Ks = 0.1777)

PSMA6 ENSBTAG00000009683 (Cow)

Gene Details

Proteasome subunit alpha type-6

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000012773, Cow)

Protein Percentage 89.3%
cDNA percentage 88.84%
Ka/Ks Ratio 0.27231 (Ka = 0.0797, Ks = 0.2926)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 651 bp    Location:155936..135095   Strand:-
>bmy_14670
ATGGGAGCCCGAAGGCTGAAGGCCTCGGGCTCTCCAGGGCAAGCGGCCGCACTGCCTGGACACTGTAAAGCGTTAAGGAAGGACAAATTATTGGATTCCAGCACAGTGACTCACTTATTCAAGATAACCGAAAACATTGGCTGCGTGATGACAGGAATGACAGCTGACAGCAGATCCCAGGTACAGAGGGCACGCTATGAAGCAGCTAATTGGAAATACAAGTATGGTTACGAGATTCCTGTGGACATGCTGTGTAAAAGAATTGCTGATATTTCTCAGGTCTACACACAGAATGCTGAAATGAGGCCTCTTGGTTGTTGTATGATTTTAATCGGTATAGATGAAGAACAAGGCCCTCAGGTGTACAAGTGTGATCCTGCAGGTTACTACTGTGGGTTTAAAGCCACTGCAGCAGGAGTCAAACAAACCGAGTCAACCAGCTTCCTTGAAAAAAAAGTGAAGAAGAAATTTGATTGGACATTTGAACAGACAGTGGAAACTGCAATTACATGCCTGTCTACTGTTCTATCAATTGATTTCAAACCTTCAGAAATAGAAGTTGGAGTAGTTACAGTTGAAAATCCTAAATTCAGGATTCTTACAGAAGCAGAGATTGATGTTCACCTTGTTGCTCTAGCAGAGAGAGACTAA

Related Sequences

bmy_14670T0 Protein

Length: 217 aa      View alignments
>bmy_14670T0
MGARRLKASGSPGQAAALPGHCKALRKDKLLDSSTVTHLFKITENIGCVMTGMTADSRSQVQRARYEAANWKYKYGYEIPVDMLCKRIADISQVYTQNAEMRPLGCCMILIGIDEEQGPQVYKCDPAGYYCGFKATAAGVKQTESTSFLEKKVKKKFDWTFEQTVETAITCLSTVLSIDFKPSEIEVGVVTVENPKFRILTEAEIDVHLVALAERD*