Part of scaffold_1033 (Scaffold)

For more information consult the page for scaffold_1033 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

FERMT1 ENSTTRG00000012920 (Bottlenosed dolphin)

Gene Details

fermitin family member 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000012258, Bottlenosed dolphin)

Protein Percentage 88.51%
cDNA percentage 88.8%
Ka/Ks Ratio 0.31163 (Ka = 0.0089, Ks = 0.0285)

FERMT1 ENSBTAG00000020465 (Cow)

Gene Details

fermitin family homolog 1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000027271, Cow)

Protein Percentage 93.75%
cDNA percentage 93.02%
Ka/Ks Ratio 0.1917 (Ka = 0.0362, Ks = 0.1889)

FERMT1  (Minke Whale)

Gene Details

fermitin family member 1

External Links

Gene match (Identifier: BACU014772, Minke Whale)

Protein Percentage 96.45%
cDNA percentage 97.07%
Ka/Ks Ratio 0.44173 (Ka = 0.0232, Ks = 0.0525)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1836 bp    Location:62640..104847   Strand:+
>bmy_14743
ATGCTCTCATCCAGTGACTTTGCGTCTGCTTCTTGGGAACTCGTGATCCAAGTTGACCATCCAAATGAAGAGGAGCAGAAGGACGTCACACTGAGAGTGTCTGGAGACCTGCACATTGGGGGAGTGATGCTCAAGTTAGTGGAACAGATCAACATAGCCCAGGACTGGTCAGACTTTGCCCTTTGGTGGGAACAGAAGCACTGCTGGCTTCTGAAAACGCACTGGACCCTGGACAAATGTGGGGTCCAGGCAGATGCAAAGCTTCTCTTCACCCCTCAGCATAAAATGCTTCGCCTCCGCCTGCCCAATGTGAAGACAGTGCGACTGCGAGTCAGCTTCTCGGCCGTGGTCTTCAGAGCGGTCAGCGACATCTGCAGAGCCCTGATAAGTCCTGGCTTATACAGTAGAACCATGACCCCCACATATGACCCCATCAACGGAACACCAGTGTCATCCACAATGACTTGGTTCAGTGACAGCCCTTTGACTGAACAAAACTGCAGTATCCTCGCATTCAGCCAGCCCCCTCAGTCACCAGAAGCTCTTGCTGACATGTACCAGCCTCGGTCTCTGGTTGACAAAGCCAAGCTTAACGCAGGTTGGCTAGACTCCTCACGTTCCCTTATGGAACAAGGCATCCAGGAGGATGAGCAGCTGCTGTTACGATTTAAATACTACACTTTCTTTGACTTGAATCCCAAATATCACATTAGCAAACTGTCGTTGTCTACTGAAATACAGGATTTTACAAATGAGTCTGAGGTCGACGAAGTAGAAGCAGCACTTTCTAATTTGGAAGTGACCCTGGAAGGTGGAAAAGCAGACAACACTTTGGTCAATCTGAAACTGTTAAAAAGGCAGAGAAGTTTTTTACCTTCTTCATGGAAAGAAAGGGCTGCCACATTTGTGATGGTGCCAAGGCCCAAGAAGCTGATATTAAAAGCTTTCAAACAATATTGGTTCATCTTTAAAGACACGTCTATAGCCTACTTTAAAAATAAGGAACTTGAACAAGGAGAACCAGTAGAAAAACTAAATCTTAGAGGCTGTGAAGTTGTGCCAGATGTAAATGTAGCAGGGAGAAAATTTGGAATCAAGTTACTAATCCCGGTTGCTGATGGTATGAATGAAGTATATCTGAGATGTGACCATGTAAGTAAAACCACAAAAATGGAGAGTCAGTATGCCCAGTGGATGGCTGCCTGCATCTTGGCATCAAAGGGCAAAACCATGGCGGACAGCTCCTACCAGCCAGAGGTCCTTAACATCCTTTCATTTCTGAGGATGAAAAACCGGAACTCAGCATCTCAGGTGGCTTCCAGTCTCGAAAACATGGATATGAACCCGGAATGTTTTGTGTCACCTAGGTGTGCAAAAAAGTACAAGTCTAAACAGCTGGCAGCCCGCATCCTGGAAGCCCATCAGAACGTGGCCCAGATGCCCCTGGTCGAAGCCAAGCTGCGGTTCATTCAGGCATGGCAGTCTCTACCTGAATTCGGCCTCACCTACTACCTTGTCAGATTTAAAGGAAGCAAGAAAGATGACATTCTGGGAGTTTCATATAATAGGTTGATTAGAATCGATGCAACCACTGGGATTCCAGTTACAACATGGAGATTTACAAATATGAAACAGTGGAATGTAAACTGGGAAATCCGGCAGGTGGCGATCGAATTTGACCAGAACGTCTCCATCGCATTCACCTGCCTGAGTGCGGATTGCAAAGTCGTGCATGAGTACATCGGGGGCTACATTTTCCTGTCCACCCGCTCCAAGGACCAGAATGAAACGCTCGATGAGGACCTGTTCCACAAGTTGACCGGCGGCCAGGAGTGA

Related Sequences

bmy_14743T0 Protein

Length: 612 aa      View alignments
>bmy_14743T0
MLSSSDFASASWELVIQVDHPNEEEQKDVTLRVSGDLHIGGVMLKLVEQINIAQDWSDFALWWEQKHCWLLKTHWTLDKCGVQADAKLLFTPQHKMLRLRLPNVKTVRLRVSFSAVVFRAVSDICRALISPGLYSRTMTPTYDPINGTPVSSTMTWFSDSPLTEQNCSILAFSQPPQSPEALADMYQPRSLVDKAKLNAGWLDSSRSLMEQGIQEDEQLLLRFKYYTFFDLNPKYHISKLSLSTEIQDFTNESEVDEVEAALSNLEVTLEGGKADNTLVNLKLLKRQRSFLPSSWKERAATFVMVPRPKKLILKAFKQYWFIFKDTSIAYFKNKELEQGEPVEKLNLRGCEVVPDVNVAGRKFGIKLLIPVADGMNEVYLRCDHVSKTTKMESQYAQWMAACILASKGKTMADSSYQPEVLNILSFLRMKNRNSASQVASSLENMDMNPECFVSPRCAKKYKSKQLAARILEAHQNVAQMPLVEAKLRFIQAWQSLPEFGLTYYLVRFKGSKKDDILGVSYNRLIRIDATTGIPVTTWRFTNMKQWNVNWEIRQVAIEFDQNVSIAFTCLSADCKVVHEYIGGYIFLSTRSKDQNETLDEDLFHKLTGGQE*