Part of scaffold_1033 (SequenceType object (1))

For more information consult the page for scaffold_1033 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

LRRN4ENSTTRG00000012913 (Bottlenosed dolphin)

Gene Details

leucine rich repeat neuronal 4

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000012251, Bottlenosed dolphin)

Protein Percentage 77.9%
cDNA percentage 82.0%
Ka/Ks Ratio 0.6182 (Ka = 0.1212, Ks = 0.196)

LRRN4ENSBTAG00000000066 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000000073, Cow)

Protein Percentage 75.28%
cDNA percentage 81.3%
Ka/Ks Ratio 0.38015 (Ka = 0.1656, Ks = 0.4357)

LRRN4 (Minke Whale)

Gene Details

leucine rich repeat neuronal 4

External Links

Gene match (Identifier: BACU014771, Minke Whale)

Protein Percentage 86.55%
cDNA percentage 89.42%
Ka/Ks Ratio 0.65825 (Ka = 0.0981, Ks = 0.1491)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence SequenceType object (2)

Length: 2223 bp    Location:132359..143930   Strand:+
>bmy_14744
ATGTGGTGGACTCCGCTGCTGCTGCTGCTGCTGCTGCTGTCGACGGCGCCGCGCCCGAGCCGGGCGGGGCCTCTCCAGAAGGCCCCAGTTTTCCAGCTCACTCACCAGGGCCCCTGGGGGAGCGGGGTCGGCAACGCCACGGTCTCGCCCTGCGAAGGGCTCCCCGCCGCGGGAGTCACGACCCTGACCCTCGCGAACCGCGGCCTGGAGCGCCTGCCGGGCTGCCTGCCGCGCGCGCTTCATAGTCTCGACGGCAGCCACAACCTGCTGCGCGCCCTGAGCGCGCCCGAGCTCGGTCACCTGCCGCGGCTGCAGGTGCTGACGCTGCGCCACAACCGCATCGCCGCGCTGCGCTGGGGCCCCGGCGCGCCCGCGGGACTGCACACGCTCGACCTCAGCTACAACCTGCTGGAAGCCCTGCCGCCGTGCTCCGGGCCCGTGCTGCCCGGCCTCCGAACGCTGGCGCTGGCCGGGAACCCGCTGCGGGCGCTGCAGACCGGAGCCTTCGCCTGCTTCCCCGCGCTGCGCCTGCTCAACCTGTCCTGCACCGCGCTGGGCCGCGGCGACCACGCTGGCATCGCCGACGCTGCCTTCACGGGGGCTGGTGGCGCGCCCCTGGCTGCGCTCGAGGTCCTGGATCTCAGCGGCACTTTCCTCCGGCGCGGTAGTGGGCAGTTTCCCCTCTGTGTTTCAGTTCAGTCAGGATGGATCAGAGACCTGCCGAAGCTCACGTCCCTCTACCTAAGGAAGATGCCCAGGCTGAACAGCCTGGAGGGGCACATTTTCAAGGTGACCCCTGACCTGCAGCAGCTGGATTGTCAAGATTCGCCAGCACTTACCTCTGTCCATACACACATCTTTCAAGACACGCCTCTCCTACAGGTCCTTCATTTCCAGAACTGCAACTTGAGTTCCTTCCCTCCTTGGAACCTGCATTCCTCCCAGGTCCTGTCCATCAACCTCTTTGGCAACCCTCTCACTTGCAGCTGTGAGTTGTCCTGGCTCCTCATGGATGCAAAGAGGATTGTCCTAAGCAGGGCAGCAGACACTGTGTGCACACCAGCAGCAGGATCCAGTGGCACCTTCTCAGCCCCTCTTTTGCTGTCCCAGCTGCCAAGTGTGTGCCATTCGGACCAAAACACCACCTTCCTTGATTCCAACCCACCCTCCTCAGTCTTCTCCACCCACACACCATCTACACAGGGTCCCTCCACCCTGCGGAGCACAGCCCCCTCTACCCAATCTGCGGGAGGCCGACCGAGTGTCACCAAGGTGCCCTCCCTCCCTGTGGATTCCCCCACACGAGCGGCGGGGCCGCGGCACAGCCTTGCCGAGGACGGGGCCGTTCCCTCCACTACTGTCTCTCCAGCAGGTTCCAGCAACTCTGGCAACCCACCTAGGGCTGCGAGCACAGCCGGGACAGAGCACCAAGAAGAACATGCTGCCCGGCTTGTCCTGGAACCTACTATCTCAGTTGCCTCCACCCCATGGGCCAGCAAACACCCGGGTCTCTCCCCTACCTCCCGGAGCCCAGGGAGCACGCCTCAGCCCGCCCGGGGGACACGGGCCACCCCGCGGGCTCCCCACCCGCCTCCTTCCGAGGGCGGGATTCCGGTCCTGCTCCTGGACGACTCCAGTGAGGAGGAGGAAGAGAGCGGGAAGGAGGAAGTGGGGGCGCCGGCCCGGGATGAGCCCTGCGATTACCACCCCTGCAGGCACCTCCAGACGCCGTGCGCAGAGCTGCAGCGGCGCTGGCGGTGCCGGTGCCCCGGCCTCAGCGGGGAAGACACCCTCCCGGACCCCCCCAAGCTGCAGGCGGTGGCCGAGACCACTGACACGTCGGCGCTAGTGCGCTGGTGCGCCCCCAACTCGGTGGTGCGCGCCTACCAGATTCGCTACGCGCCCGAGGGCCGGCCGGGGAACCAGTCGGTGAAACGTGATGGTTCACGCTGCCGGGCATCCCTGTGTGTGGTTTTATTGGGGTTTTTCAGCAGTCAGTGCCCCTCAGCGTCCGGTAGAATAAATAGAATTGTGTGTGGAAGTAGGAAGAGAGAAAACAAATGGCACAATGCGGCCGCTTTTCTCATATTGGAAACGACATCCTCAAGTCATTTCAGAGAAGTTCCTCATGGTCAAGCTCTGGCTAAGGGTCCTGTTATTCAAGGTAACGACTCCAGTGGATTCTCATCACCCTCTCCTCCCCACAGTGGAGTCTTAACCTGA

Related Sequences

bmy_14744T0 SequenceType object (3)

Length: 741 aa      View alignments
>bmy_14744T0
MWWTPLLLLLLLLSTAPRPSRAGPLQKAPVFQLTHQGPWGSGVGNATVSPCEGLPAAGVTTLTLANRGLERLPGCLPRALHSLDGSHNLLRALSAPELGHLPRLQVLTLRHNRIAALRWGPGAPAGLHTLDLSYNLLEALPPCSGPVLPGLRTLALAGNPLRALQTGAFACFPALRLLNLSCTALGRGDHAGIADAAFTGAGGAPLAALEVLDLSGTFLRRGSGQFPLCVSVQSGWIRDLPKLTSLYLRKMPRLNSLEGHIFKVTPDLQQLDCQDSPALTSVHTHIFQDTPLLQVLHFQNCNLSSFPPWNLHSSQVLSINLFGNPLTCSCELSWLLMDAKRIVLSRAADTVCTPAAGSSGTFSAPLLLSQLPSVCHSDQNTTFLDSNPPSSVFSTHTPSTQGPSTLRSTAPSTQSAGGRPSVTKVPSLPVDSPTRAAGPRHSLAEDGAVPSTTVSPAGSSNSGNPPRAASTAGTEHQEEHAARLVLEPTISVASTPWASKHPGLSPTSRSPGSTPQPARGTRATPRAPHPPPSEGGIPVLLLDDSSEEEEESGKEEVGAPARDEPCDYHPCRHLQTPCAELQRRWRCRCPGLSGEDTLPDPPKLQAVAETTDTSALVRWCAPNSVVRAYQIRYAPEGRPGNQSVKRDGSRCRASLCVVLLGFFSSQCPSASGRINRIVCGSRKRENKWHNAAAFLILETTSSSHFREVPHGQALAKGPVIQGNDSSGFSSPSPPHSGVLT*