Part of scaffold_1033 (Scaffold)

For more information consult the page for scaffold_1033 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TRMT6 ENSTTRG00000012889 (Bottlenosed dolphin)

Gene Details

tRNA methyltransferase 6 homolog (S. cerevisiae)

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000012224, Bottlenosed dolphin)

Protein Percentage 98.79%
cDNA percentage 98.39%
Ka/Ks Ratio 0.06487 (Ka = 0.0019, Ks = 0.0287)

TRMT6 ENSBTAG00000001314 (Cow)

Gene Details

tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit TRM6

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000001734, Cow)

Protein Percentage 96.58%
cDNA percentage 96.04%
Ka/Ks Ratio 0.13068 (Ka = 0.0156, Ks = 0.1193)

TRMT6  (Minke Whale)

Gene Details

tRNA methyltransferase 6 homolog (S. cerevisiae)

External Links

Gene match (Identifier: BACU014768, Minke Whale)

Protein Percentage 99.01%
cDNA percentage 99.07%
Ka/Ks Ratio 0.19792 (Ka = 0.0044, Ks = 0.0224)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1668 bp    Location:240254..251983   Strand:+
>bmy_14748
AAGCGGCGGGCAGCACGTGGGGGCGGTGCCGGTCGGAGGGCTTTGAGTCTTCTTGGTTTGTGGGAGGTGAGGCTGCTAGCGGCTACAGCCCAGGGCCAGGGGCAGAGCGCGGGGAACTGGAGAGACGCTGCGGAGCTTGGAGACCGGCTGAGCGTCATGGAGGGCTCTGAGGAGCAACCGGGCCCACGGCCACCGCATCCCGGGGACCACCGCATCCGCGACGGCGACTTCGTGGTGCTGAAACGGGAAGATGTGTTTAAAGCAGTGCAAGTCCAGCGGAGAAAAAAAGTAACTTTTGAAAAACAGTGGTTCTATCTGGATAACGTCATTGGCCATAGTTATGGAACCACATTTGAAGTGACCAGTGGAGGAAGTCTTCAGCCTAAGAAGAAGACGGAAGAGCCTACTTCAGAGACCAAAGAAGCGGGCACTGATAATCGAAATATAATTGATGATGGGAAATCTCAGAAACTTACTCAAGATGACATAAAAGCTTTAAAGGACAAAGGCATTAAAGGCGAGGAAATAGTTCAGCAATTAATTGAAAATAGTACAACATTCCGAGACAAGACAGAATTTGCTCAAGATAAATATATAAAAAAGAAGAAAAAGAAATATGAAGCCATGATTACTGTTGTGAAGCCATCCACCCGCATTCTTTCAGTTATGTATTATGCAAGAGAACCTGGAAAAATTAACCACATGAGATACGATACACTAGCCCAGATGCTGACGTTGGGAAATATCCGTGCTGGCAATAAAATGATTGTGATGGAAACATGTGCGGGCTTGGTGCTGGGTGCAATGATGGAACGAATGGGAGGTTTTGGCTCCATTATTCAGCTGTACCCTGGAGGTGGACCTGTTCGGGCAGCAACAGCATGTTTTGGATTTCCAAAATCTTTCCTCAGTGGTCTTTATGAATTCCCCCTCAACCAAGTGGACAGTCTCTTAAATGGAACATTTTCTGCTGAGATGTTATCTTCAGAGCCAAAAGACAGTGCTTCGGTTGAAGAAAGTAATGGCACACTGGAGGAAAAACAGACTTCAGAACAAGAGAACGAAGACAGCATGCCAGAGGCCCCAGAGAGCAATCACCCAGAAGAACAAGAAACAATGGAAATTGTCTCTCAAGATCCAGACTATAAGGAGCCTAAAGAGAGAGGAAGCAAAAAGGATTATATTCAGGAAAAGCAGAGGAGACAAGAAGAGCAGAAGAAAAGACATTTAGAGGCTGCTGCTCTGCTGAGTGAAAGAAACGCCGACGGTTTAATTGTAGCTAGTCGTTTCCATCCCACTCCACTGCTGCTGTCTTTGCTGGACTTTGTGGCTCCTTCAAGGCCGTTCGTGGTCTACTGTCAATATAAAGAGCCTCTGTTGGAATGCTACACAAAACTGCGRGAAAGAGGAGGGGTCATCAATCTCAGGCTGTCTGAAACCTGGCTCAGAAATTACCAGGTTTTGCCAGATCGAAGTCATCCCAAACTACTGATGAGTGGAGGTGGGGGGTACCTTCTCTCAGGCTTCACTGTTGCCATGGACAACCTTAAAGCAGATCCCAGTCTCAAATCCAGCACCAGCATTTTAGAATCACACAAGACTGAAGAGCCAGCAGCTAAAAAACGGAAGTGCCCAGAGTCTGACTCAACCTTTCAAAAATTGCTCTGA

Related Sequences

bmy_14748T0 Protein

Length: 556 aa      View alignments
>bmy_14748T0
KRRAARGGGAGRRALSLLGLWEVRLLAATAQGQGQSAGNWRDAAELGDRLSVMEGSEEQPGPRPPHPGDHRIRDGDFVVLKREDVFKAVQVQRRKKVTFEKQWFYLDNVIGHSYGTTFEVTSGGSLQPKKKTEEPTSETKEAGTDNRNIIDDGKSQKLTQDDIKALKDKGIKGEEIVQQLIENSTTFRDKTEFAQDKYIKKKKKKYEAMITVVKPSTRILSVMYYAREPGKINHMRYDTLAQMLTLGNIRAGNKMIVMETCAGLVLGAMMERMGGFGSIIQLYPGGGPVRAATACFGFPKSFLSGLYEFPLNQVDSLLNGTFSAEMLSSEPKDSASVEESNGTLEEKQTSEQENEDSMPEAPESNHPEEQETMEIVSQDPDYKEPKERGSKKDYIQEKQRRQEEQKKRHLEAAALLSERNADGLIVASRFHPTPLLLSLLDFVAPSRPFVVYCQYKEPLLECYTKLRERGGVINLRLSETWLRNYQVLPDRSHPKLLMSGGGGYLLSGFTVAMDNLKADPSLKSSTSILESHKTEEPAAKKRKCPESDSTFQKLL*