Part of scaffold_1033 (Scaffold)

For more information consult the page for scaffold_1033 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CHGB ENSTTRG00000000913 (Bottlenosed dolphin)

Gene Details

chromogranin B (secretogranin 1)

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000000860, Bottlenosed dolphin)

Protein Percentage 93.06%
cDNA percentage 95.58%
Ka/Ks Ratio 0.50815 (Ka = 0.0362, Ks = 0.0712)

CHGB ENSBTAG00000011782 (Cow)

Gene Details

Secretogranin-1 Secretogranin-1(476-566) Peptide BAM-1745 Secretolytin CCB peptide

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000015645, Cow)

Protein Percentage 81.66%
cDNA percentage 88.52%
Ka/Ks Ratio 0.47727 (Ka = 0.1016, Ks = 0.2128)

CHGB  (Minke Whale)

Gene Details

chromogranin B (secretogranin 1)

External Links

Gene match (Identifier: BACU014767, Minke Whale)

Protein Percentage 97.17%
cDNA percentage 98.27%
Ka/Ks Ratio 0.39551 (Ka = 0.0122, Ks = 0.0307)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 2232 bp    Location:276802..263281   Strand:-
>bmy_14749
ATGAGAAAAAAGAAAAACCCAGAGCACCAAGGCGACTGGACTGGCGTAAATTTCTTCCTACTTGCGCCACCGCCCCCGGGGCCGCCTCATGACGTCAGGGCTGAGCGAGGGGGCGCCGCCTCCTGGGTGCCCGCCCCTCCCGGCCCTGCGGCCCCAGCTTGCTCTTTAAAAGAGCGGGGCCTGCGCCAACCGCGCCACACCGCGGGGACCAGGATACAAGGCTATTTTCCCGGAGTATCTTCATCTCGCCTTCCGTCCACGTCTGCTCACCGCCAGCCGCCGCCCTCTTCTCCTGCGCAGATTCCGGCGAGCCGGGCCATGCAGCCCGCAGTGCTTCTCGGCCTCCTTGGAGCCACGATGATGGCGGCTGTCAGTTCTATGCCAGTGGACATCAGGAACCACAGTGAAGAAATGGTGACTCGCTGCATCATCGAGGTCCTCTCAAATGCCTTGTCGAAGTCCAACACTCCACCCATCACCCCTGAGTGCCGACAAGTCCTGAAGAAGAGTGGAAAACAGCTCAAAGATGAAGGGAAAAGTGAAAATGAAAACACAAGGTTTGAAGTGAGATTGTTAAGAGACCCAGCTGATGCCTCAGAAGCCCCCAGGACCTCCAGTAGGGAGGACGCAGGGGAGGAGGACGCCCAAGGCCAGACAGTGGCAGACACAGAGGGCGGTGGGCACAGCCGAGAGCGGGCAGGCGAGCCCCAAGGCAGCCAAGTGGCCAAAGAAGCAAAGACACGCCATTCTGAGAAGAGCAAGGGACACGACAGGGAGGAAGAGGAGGCGGAGGAATATCAGAAAAGGGAGCGTGTGGAAGACGGCAGTGAGGAGAGACACCCTGGAGGGCCAGGAGAGGCACAAACTGCTCTTCTCAGCCACAGAAACCAGACTCCAGCTAAGAAAGAGGAGTTAGTGTCCAGATACGATACGCAGTCTGCGGGCGGCCTTGAGAAGTCGCACAGCCGGGAGAGGAGCAGCCAGGAGAGTGGAGAGGAGACCGGGAGCCAGGAGAATGGGCCCCGAGAGCCGCAAAGCCACCCCGAGCGCCGGGAAGGACCCGAGGAGAGCGAGGAGGATGTCAGCCCCGAGGTGGACAAGCGACGCTCGAGGCCAAGACACCACCACGGGAGGAGCAGGCCCGACAGGTCCTCTCAGGAAGGGAATCCTCCCCCTGAGGGAAGGGGGTACTCCCGGGAGGAGCCCCACGTGGGCACAGCCGGCTCAGGGGAAAAGAGAGCCCGCCATCCAACCCTCTCCAGGGCTTCGGAGGAAGAAGCCGAATACGGGGAGGAAGTGAGGAGTCACCCGGCTGCCCGGGCTCCCAGGCCTCCCAGCGAGGAGAGCCTGGAGCAGGAGGACAGGAGGAAAGGCCTCAGCCTAGAGCTGAATAGCATGGCGCACGGGTACGACGAGGAGAGCGAGGAAGAGAGAGGCCAGGAGGGGGGACCCCGCCACAGAGCCCGGGGAGGGGAGCCGGGAGCCTACTCCACGCTACACCAAACAGAAGAGAAACGGTTCTTGGGTGAAGCACACCACCGTGCTCAGGAAAGCCAGACGGACAAGGCGAGGCGGCATCCACCAGGCGAGTTGAGAAATTACCTCGACTATGATGAAGAAAAGGGTGAGGAAGGAGCCCGAGGGAGGTGGCCGCAGCTGGGGGACCCGCAAGACGCTGAGGAGAACAGGGAAGAAGCTAGGCTTCGAGGCAAACAGCGTGCTCCCCATCACATCACCGAACAGAAGAGATTAGGGGAGCTTGCCAGTCCGTACTACGGCCCTCCCCAGTGGAAGAGCAGCCGGTTTGACAGAAAAGACCACATGGGTGACAGTTTTCTTGAGGGCGAAGAGGAGAACGGGCTGACCTTGAATGAGAAGAATTTCTTCCCAGAATACAACTATGACTGGTGGGAGAAAAAGCCCTTTGAGGAGGGTGTAAACTGGGGGTATGAGAAGAGAAACCTGGCCCCCAAACTGGATCTGAAAAGGCAGTATGACAGAGTGGCCGAACTGGACCAGCTCCTTCACTACAGGAAGAAGTCGGCTGAGTTCCCAGACTTCTATGACTCGGAGGAGCAGATGGGCCATCGCCACGCAGCAGAAAATGAAGAGGAGAGGGCTGGCCAAGGAGTTCTGACGGAGGAAGAGGAAAAAGAACTTGAAAACTTGGCTGCGATGGATTTGGAACTACAGAAAATAGCTGAGAAATTCAGTGGTAACCRAAGGGGCTGA

Related Sequences

bmy_14749T0 Protein

Length: 744 aa      View alignments
>bmy_14749T0
MRKKKNPEHQGDWTGVNFFLLAPPPPGPPHDVRAERGGAASWVPAPPGPAAPACSLKERGLRQPRHTAGTRIQGYFPGVSSSRLPSTSAHRQPPPSSPAQIPASRAMQPAVLLGLLGATMMAAVSSMPVDIRNHSEEMVTRCIIEVLSNALSKSNTPPITPECRQVLKKSGKQLKDEGKSENENTRFEVRLLRDPADASEAPRTSSREDAGEEDAQGQTVADTEGGGHSRERAGEPQGSQVAKEAKTRHSEKSKGHDREEEEAEEYQKRERVEDGSEERHPGGPGEAQTALLSHRNQTPAKKEELVSRYDTQSAGGLEKSHSRERSSQESGEETGSQENGPREPQSHPERREGPEESEEDVSPEVDKRRSRPRHHHGRSRPDRSSQEGNPPPEGRGYSREEPHVGTAGSGEKRARHPTLSRASEEEAEYGEEVRSHPAARAPRPPSEESLEQEDRRKGLSLELNSMAHGYDEESEEERGQEGGPRHRARGGEPGAYSTLHQTEEKRFLGEAHHRAQESQTDKARRHPPGELRNYLDYDEEKGEEGARGRWPQLGDPQDAEENREEARLRGKQRAPHHITEQKRLGELASPYYGPPQWKSSRFDRKDHMGDSFLEGEEENGLTLNEKNFFPEYNYDWWEKKPFEEGVNWGYEKRNLAPKLDLKRQYDRVAELDQLLHYRKKSAEFPDFYDSEEQMGHRHAAENEEERAGQGVLTEEEEKELENLAAMDLELQKIAEKFSGNXRG*