Part of scaffold_1033 (Scaffold)

For more information consult the page for scaffold_1033 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

GPCPD1 ENSTTRG00000004850 (Bottlenosed dolphin)

Gene Details

glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae)

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000004598, Bottlenosed dolphin)

Protein Percentage 92.46%
cDNA percentage 92.3%
Ka/Ks Ratio 0.19434 (Ka = 0.0144, Ks = 0.0744)

GPCPD1 ENSBTAG00000008293 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000010913, Cow)

Protein Percentage 95.84%
cDNA percentage 94.77%
Ka/Ks Ratio 0.13794 (Ka = 0.0236, Ks = 0.1708)

GPCPD1  (Minke Whale)

Gene Details

glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae)

External Links

Gene match (Identifier: BACU014763, Minke Whale)

Protein Percentage 87.35%
cDNA percentage 90.24%
Ka/Ks Ratio 0.5943 (Ka = 0.0935, Ks = 0.1573)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 2115 bp    Location:553614..614246   Strand:+
>bmy_14752
ATGAACCCAGGCCAGGTCTCTGCGGCGGCTCCCGGCCAGCAGAAAACCAAGCGCCGGGTACCTCAGGGAGGCCCGGCCACCCTCGGCCACGGACGCAGGCCCTTTCCAGGAACGCGCGGGCCCGCCCCCCGCACGCGGCCGCCCATTGCCGCCTGGGGGAGCGCTGGCGAGGCGCGGACGGCGGGCGCCCGGCACCTCGGCCCGCGGCACTGGCTCTCGGGAGCGGCGTCGGTGGCGGCGCGGACCCGCGGACCCGGCAGATTTTTCTGGTCCATACATTCTTACAGAATAGGAGAGGTTTTTGCAATATGTGGAAGCTCTGATGCTTTGGGAAACTGGAATCCTCAAAATGCTGTGGCTCTTCTTCCAGAGAACGAGACAGGTGAAAGCATGTTATGGAAAGCAACCATTGTACTTAGTAGAGGAGTATCAGTTCAGTACCGCTACTTCAAAGGGTGCTTTTTAGAACCAAAGACTATCGGTGGTCCATGTCAAGTCATAGTTCACAAGTGGGAGACTCATCTACAACCACGATCAATAACCCCTTTAGAAAGTGAAATTATTATTGACGATGGACAATTTGGAATCCACAATGGTGTTGAGACTCTGGATTCTGGATGGCTGACATGTCAGACTGAAATCAGATTACGTTTGCATTATTCTGAGAAACCTCCTGTCTCAATAACCAAGAAAAAATTTAAAAAATCTAGGTTTAGGGTAAAGCTGACACTAGAGGGTCCGGAGGAAGATGACGATGATAGGGTATCTCCCACTCTTCTTCACAAAATGTCCAATACTCTGGAGATATCCTTAATAAGCGACAATGAGTTCAAGTGCAGGCATTCACAGCCGGAGTGTGGGTATGGCTTACAGCCTGATCGTTGGACAGAGTATAGTATACAGACAATGGAACCAGATAACCTGGAACTAATATTTGATTTTTTTGAGGAAGATCTCAGTGAACACATAGTTCAGGGCGATGCTCTTCCTGGACATGTGGGTACAGCATGCCTCTTATCATCCACCATTGCAGAGAGTGGGAAGAGTGCTGGAATCCTTACTCTTCCCATCATGAGCAGAAATTCCAGAAAAACAATAGGCAAAGTGAGAGTTGACTATATAATTATTAAGCCGTTACCAGGATACAATTGTGACATGAAATCTTCATTTTCCAAGTATTGGAAGCCAAGAATACCATTGGATGTTGGACATCGAGGTGCAGGGAATTCTACAACAACGGCTCAGCTTGCTAAAGTTCAAGAAAATACTATCGCTTCTTTAAGAAATGCTGCTAGTCATGGTGCAGCCTTTGTAGAATTTGATGTACATCTTTCAAAAGATTTTGTGCCTGTAGTGTATCATGATCTGACCTGTTGTTTGACTATGAAAAAGAAATTTGATGCTGATCCAGTTGAATTATTTGAAATTCCAGTAAAAGAATTAACCTTTGACCAACTCCAGTTGTTAAAGCTCACTCATGTGACTGCACTAAAATCTAAAGAACTGAAAGAATCTGTGGTTGAGGAGGAAAATTCCTTTTCTGAAAATCAGCCATTTCCTTCTCTTAAGATGGTTTTAGAGTCTTTGCCAGAAGATGTAGGGTTTAACATAGAAATAAAATGGATCTGCCAACAAAGGAGGAGAATAGTATTTTCTTCATTTGATGCAGATATTTGCACAATGGTTCGGCAAAAGCAGAACAAATATCCCATATTATTTTTGACTCAGGGGAAATCTGATATTTACCCTGAACTCATGGACCTCAGATCTCGGACAACCCCCATTGCAATGAGCTTTGCACAGTTTGAAAATCTACTGGCAAAAGCTAAGGGACTGGTCATATTCTGCTGGGGTGATGATACCAATGATCCTGAAAACAGAAAGAAATTAAAGGAATTTGGAGTTAATGGTCTAATTTATGATAGGATATATGATTGGATGCCTGAACAGCCAAATATATTCCAAGTGGAGCAGTTGGAACGTCTGAAACAAGAATTGCCAGAGCTTAAGAGCTGTTTGTGTCCCACTGTTAGCCGCTTTGTCCCCTCGTCTTTTTGTGGGGAGCCTGACATCCATGTGGATGCCAACGGCATAGATAATGTGGAGAATGCTTAG

Related Sequences

bmy_14752T0 Protein

Length: 705 aa      View alignments
>bmy_14752T0
MNPGQVSAAAPGQQKTKRRVPQGGPATLGHGRRPFPGTRGPAPRTRPPIAAWGSAGEARTAGARHLGPRHWLSGAASVAARTRGPGRFFWSIHSYRIGEVFAICGSSDALGNWNPQNAVALLPENETGESMLWKATIVLSRGVSVQYRYFKGCFLEPKTIGGPCQVIVHKWETHLQPRSITPLESEIIIDDGQFGIHNGVETLDSGWLTCQTEIRLRLHYSEKPPVSITKKKFKKSRFRVKLTLEGPEEDDDDRVSPTLLHKMSNTLEISLISDNEFKCRHSQPECGYGLQPDRWTEYSIQTMEPDNLELIFDFFEEDLSEHIVQGDALPGHVGTACLLSSTIAESGKSAGILTLPIMSRNSRKTIGKVRVDYIIIKPLPGYNCDMKSSFSKYWKPRIPLDVGHRGAGNSTTTAQLAKVQENTIASLRNAASHGAAFVEFDVHLSKDFVPVVYHDLTCCLTMKKKFDADPVELFEIPVKELTFDQLQLLKLTHVTALKSKELKESVVEEENSFSENQPFPSLKMVLESLPEDVGFNIEIKWICQQRRRIVFSSFDADICTMVRQKQNKYPILFLTQGKSDIYPELMDLRSRTTPIAMSFAQFENLLAKAKGLVIFCWGDDTNDPENRKKLKEFGVNGLIYDRIYDWMPEQPNIFQVEQLERLKQELPELKSCLCPTVSRFVPSSFCGEPDIHVDANGIDNVENA*