Sequence detailsbmy_14752 (Coding sequence)

Part of scaffold_1033 (SequenceType object (1))

For more information consult the page for scaffold_1033 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

GPCPD1ENSTTRG00000004850 (Bottlenosed dolphin)

Gene Details

glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae)

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000004598, Bottlenosed dolphin)

Protein Percentage 92.46%
cDNA percentage 92.3%
Ka/Ks Ratio 0.19434 (Ka = 0.0144, Ks = 0.0744)

GPCPD1ENSBTAG00000008293 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000010913, Cow)

Protein Percentage 95.84%
cDNA percentage 94.77%
Ka/Ks Ratio 0.13794 (Ka = 0.0236, Ks = 0.1708)

GPCPD1 (Minke Whale)

Gene Details

glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae)

External Links

Gene match (Identifier: BACU014763, Minke Whale)

Protein Percentage 87.35%
cDNA percentage 90.24%
Ka/Ks Ratio 0.5943 (Ka = 0.0935, Ks = 0.1573)

Additional orthologs identified in other species via the OPTIC pipeline.

GPCPD1 (Human)   Gpcpd1 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 2115 bp    Location:553614..614246   Strand:+
Raw sequence 
>bmy_14752
ATGAACCCAGGCCAGGTCTCTGCGGCGGCTCCCGGCCAGCAGAAAACCAAGCGCCGGGTACCTCAGGGAGGCCCGGCCACCCTCGGCCACGGACGCAGGCCCTTTCCAGGAACGCGCGGGCCCGCCCCCCGCACGCGGCCGCCCATTGCCGCCTGGGGGAGCGCTGGCGAGGCGCGGACGGCGGGCGCCCGGCACCTCGGCCCGCGGCACTGGCTCTCGGGAGCGGCGTCGGTGGCGGCGCGGACCCGCGGACCCGGCAGATTTTTCTGGTCCATACATTCTTACAGAATAGGAGAGGTTTTTGCAATATGTGGAAGCTCTGATGCTTTGGGAAACTGGAATCCTCAAAATGCTGTGGCTCTTCTTCCAGAGAACGAGACAGGTGAAAGCATGTTATGGAAAGCAACCATTGTACTTAGTAGAGGAGTATCAGTTCAGTACCGCTACTTCAAAGGGTGCTTTTTAGAACCAAAGACTATCGGTGGTCCATGTCAAGTCATAGTTCACAAGTGGGAGACTCATCTACAACCACGATCAATAACCCCTTTAGAAAGTGAAATTATTATTGACGATGGACAATTTGGAATCCACAATGGTGTTGAGACTCTGGATTCTGGATGGCTGACATGTCAGACTGAAATCAGATTACGTTTGCATTATTCTGAGAAACCTCCTGTCTCAATAACCAAGAAAAAATTTAAAAAATCTAGGTTTAGGGTAAAGCTGACACTAGAGGGTCCGGAGGAAGATGACGATGATAGGGTATCTCCCACTCTTCTTCACAAAATGTCCAATACTCTGGAGATATCCTTAATAAGCGACAATGAGTTCAAGTGCAGGCATTCACAGCCGGAGTGTGGGTATGGCTTACAGCCTGATCGTTGGACAGAGTATAGTATACAGACAATGGAACCAGATAACCTGGAACTAATATTTGATTTTTTTGAGGAAGATCTCAGTGAACACATAGTTCAGGGCGATGCTCTTCCTGGACATGTGGGTACAGCATGCCTCTTATCATCCACCATTGCAGAGAGTGGGAAGAGTGCTGGAATCCTTACTCTTCCCATCATGAGCAGAAATTCCAGAAAAACAATAGGCAAAGTGAGAGTTGACTATATAATTATTAAGCCGTTACCAGGATACAATTGTGACATGAAATCTTCATTTTCCAAGTATTGGAAGCCAAGAATACCATTGGATGTTGGACATCGAGGTGCAGGGAATTCTACAACAACGGCTCAGCTTGCTAAAGTTCAAGAAAATACTATCGCTTCTTTAAGAAATGCTGCTAGTCATGGTGCAGCCTTTGTAGAATTTGATGTACATCTTTCAAAAGATTTTGTGCCTGTAGTGTATCATGATCTGACCTGTTGTTTGACTATGAAAAAGAAATTTGATGCTGATCCAGTTGAATTATTTGAAATTCCAGTAAAAGAATTAACCTTTGACCAACTCCAGTTGTTAAAGCTCACTCATGTGACTGCACTAAAATCTAAAGAACTGAAAGAATCTGTGGTTGAGGAGGAAAATTCCTTTTCTGAAAATCAGCCATTTCCTTCTCTTAAGATGGTTTTAGAGTCTTTGCCAGAAGATGTAGGGTTTAACATAGAAATAAAATGGATCTGCCAACAAAGGAGGAGAATAGTATTTTCTTCATTTGATGCAGATATTTGCACAATGGTTCGGCAAAAGCAGAACAAATATCCCATATTATTTTTGACTCAGGGGAAATCTGATATTTACCCTGAACTCATGGACCTCAGATCTCGGACAACCCCCATTGCAATGAGCTTTGCACAGTTTGAAAATCTACTGGCAAAAGCTAAGGGACTGGTCATATTCTGCTGGGGTGATGATACCAATGATCCTGAAAACAGAAAGAAATTAAAGGAATTTGGAGTTAATGGTCTAATTTATGATAGGATATATGATTGGATGCCTGAACAGCCAAATATATTCCAAGTGGAGCAGTTGGAACGTCTGAAACAAGAATTGCCAGAGCTTAAGAGCTGTTTGTGTCCCACTGTTAGCCGCTTTGTCCCCTCGTCTTTTTGTGGGGAGCCTGACATCCATGTGGATGCCAACGGCATAGATAATGTGGAGAATGCTTAG

Related Sequences

bmy_14752T0 SequenceType object (3)

Length: 705 aa      View alignments
>bmy_14752T0
MNPGQVSAAAPGQQKTKRRVPQGGPATLGHGRRPFPGTRGPAPRTRPPIAAWGSAGEARTAGARHLGPRHWLSGAASVAARTRGPGRFFWSIHSYRIGEVFAICGSSDALGNWNPQNAVALLPENETGESMLWKATIVLSRGVSVQYRYFKGCFLEPKTIGGPCQVIVHKWETHLQPRSITPLESEIIIDDGQFGIHNGVETLDSGWLTCQTEIRLRLHYSEKPPVSITKKKFKKSRFRVKLTLEGPEEDDDDRVSPTLLHKMSNTLEISLISDNEFKCRHSQPECGYGLQPDRWTEYSIQTMEPDNLELIFDFFEEDLSEHIVQGDALPGHVGTACLLSSTIAESGKSAGILTLPIMSRNSRKTIGKVRVDYIIIKPLPGYNCDMKSSFSKYWKPRIPLDVGHRGAGNSTTTAQLAKVQENTIASLRNAASHGAAFVEFDVHLSKDFVPVVYHDLTCCLTMKKKFDADPVELFEIPVKELTFDQLQLLKLTHVTALKSKELKESVVEEENSFSENQPFPSLKMVLESLPEDVGFNIEIKWICQQRRRIVFSSFDADICTMVRQKQNKYPILFLTQGKSDIYPELMDLRSRTTPIAMSFAQFENLLAKAKGLVIFCWGDDTNDPENRKKLKEFGVNGLIYDRIYDWMPEQPNIFQVEQLERLKQELPELKSCLCPTVSRFVPSSFCGEPDIHVDANGIDNVENA*