Part of scaffold_1034 (Scaffold)

For more information consult the page for scaffold_1034 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SOX30 ENSTTRG00000012986 (Bottlenosed dolphin)

Gene Details

SRY (sex determining region Y)-box 30

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000012320, Bottlenosed dolphin)

Protein Percentage 92.29%
cDNA percentage 96.34%
Ka/Ks Ratio 1.15536 (Ka = 0.04, Ks = 0.0346)

SOX30 ENSBTAG00000020491 (Cow)

Gene Details

transcription factor SOX-30

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000027304, Cow)

Protein Percentage 88.34%
cDNA percentage 92.4%
Ka/Ks Ratio 0.52356 (Ka = 0.0639, Ks = 0.122)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 2298 bp    Location:17790..50176   Strand:+
>bmy_14760
ATGGAGAGAGCCAGGCCGGAGCCGCCGCCTCAGCCGCGCCAACTGACGCGGGCGACCCCGCGGCGCCCGCTGCGCCCCGCTCCGCCCCCGCTGCCTGTCGAGGGCGCCTCCTTTCGGGCAGCGGCCGCGGAGCCCTCTGCGTCGCCGCCCACCCCGTGCGCGGCCGCCATTGCGACCGTAGCCTCGTCGTGCGGGGAGGCTACGGCGTCGGGCGTACAGCCCGCGGCACGGCGGGTGCTGCAGGTGAACCCGGAGCAGGTGTTACTGCTGCCGCCTGGGCCACCACTGCCTCAGGCCCGGGAGGAAGGCGCAGCCGCCTCTCCCGCGCAGGCGCGGCTGCTGCAGCTGAGGCCGGAGCTACTACTGCTGCCGCCGCCCTCATCCGAGGGCGCCCCCTGCAGGCCTCAGTTGCACCCGGTGCAGCCCTGGCCGCTGCATGTTAAGGCAGAGAAGCAGGAGCCGGACCCCAGCTTGGATCCGTCAGTGGGACCTCGGAGGGCCGTCAAGGCGGGCCCTAAGGCCTCCAGGGCGGCGAAGACGGGAGGCCCCGGGCCGGCCCTCGACAGCCCCCGAGGGGACGAGAAGGGCAAGTTGGAGGAGGAGGAGGTCATGAGCTACACGGCGAAAGGCGAGGAAGGCAAAAGCCTGGCGGCCATCAGAGAAGGAGTCATCAAAACGGAGGAGCCTGAGAGACTCCGCGAGGACTCCAGGCTCGGCACAGAGCCTGCGTCCAGTGGCCTGGTCCATGGCAGCAAGGATGTCATCCTGACCCAGCCGTCCAGTGCCTTTGGGCCGCACCAGCAAGACCTCAGGATCCCTTTGACTCTTCACACCGTGCCCCCTGGGGCCCGGATCCAGTTTCAGGGACCTSCACCTTCAGAGCTGATACGATTGACCAAGGTCCCCTTGACACCAGTGCCTATTAAAATGCAGTCCTTACTGGAGCCTTCTGTAAAAATTGAAACCAAAGATGTCCCGCTCACCGTACTTCCCTCAGATGCAGGAATACCAGATACTCCCTTCAGTAAGGACAGAAATGGTCATGTGAAGCGACCCATGAATGCATTTATGGTTTGGGCAAGGATCCACCGGCCAGCACTAGCCAAAGCTAACCCAGCAGCCAACAATGCAGAAATCAGTGTCCAGCTCGGGTTAGAGTGGAACAAACTTAGTGAAGAACAAAAGAAACCCTATTATGATGAAGCACAAAAGATTAAAGAAAAGCACAGAGAGGAATTTCCTGGTTGGGTTTATCAGCCTCGTCCAGGGAAGCGAAAACGCTTCCCTCTAAGCGTTTCCAATGTACTTTCTGGTACCACACAGAATATCATCTCTACAAATCCAACAACAATTTATCCTTGTTGCTCACCTACCTACTCTGTGGTAATTCCCAGCCTACAGAACACCATCACTCATTCAGTTGGTGAAGCTCTACCTGCCATCCAGCTGCCCCCACCTGCAGTCCAGTGCCCAAGCCCCATCACACTTTTCCAGCCGAGCATCTCCAGTACTGCCCAGGTGGCTGTCCAGGCTCCAAGTTTGCCCCTCTGTCCACCACTCCCACCCCAGTGCTTTGCTGGGCCCTCCCAAATGGACACTCATCAGCTGCATTCTGGAGCCAGTTGTTCTGTGAAGAGACCTACTCCTGTCTCTCTGGAGAGCACCAGCAGGATTCCAACTAGTGCAAGTACTGCCCACGCCAGATTTGCAGCTTCTACCATCCAACCTCCCAAGGGGTATCCCAGCCTCTCCACTTGTCCCAGAAGTGCTCCAATCCCTCAATCTCCTCCTATTCCACACTCACATGTCTGCCAGCCCCCTCCCCTTGGCCATGCAGCCACATTGTTTGGGACCCCACCGCGATTCTCTTTTCATCACCCTTACTTCCTACCTGGACCTCACTACTTCCCATCAAGCACGTGCCCTTATAGTCGGCCTCCTTTTGGCTATGGAAATTTTCCAAGTTCAGTGCCAGAATGCCTTGGTTATTATGAAGACAGATACCAAAAACATGAGGCTATGTTTTCAGCTTTAAATAGAGACTATCCTTTTAGAGACTACCCAGATGAGCGTGCTCACAGCGAAGATTCTCGGAGTTGTGAGAGCGTGGATGGGACCTCTTACTGTAACAGTCATATACACAGTGGGGAAGAATACTTAAATCCCGTGCCTCAGCTGGACACTGGAGCCTTGGAAAGTGTCTTCACAGCCCCGACATCAACTCCCTCTAACATCCAGCAAGTCAATGTCACTGACAGTGATGAGGAGGAAGAAGAAAAAGTGCTCAGGAATTTATAA

Related Sequences

bmy_14760T0 Protein

Length: 766 aa      View alignments
>bmy_14760T0
MERARPEPPPQPRQLTRATPRRPLRPAPPPLPVEGASFRAAAAEPSASPPTPCAAAIATVASSCGEATASGVQPAARRVLQVNPEQVLLLPPGPPLPQAREEGAAASPAQARLLQLRPELLLLPPPSSEGAPCRPQLHPVQPWPLHVKAEKQEPDPSLDPSVGPRRAVKAGPKASRAAKTGGPGPALDSPRGDEKGKLEEEEVMSYTAKGEEGKSLAAIREGVIKTEEPERLREDSRLGTEPASSGLVHGSKDVILTQPSSAFGPHQQDLRIPLTLHTVPPGARIQFQGPXPSELIRLTKVPLTPVPIKMQSLLEPSVKIETKDVPLTVLPSDAGIPDTPFSKDRNGHVKRPMNAFMVWARIHRPALAKANPAANNAEISVQLGLEWNKLSEEQKKPYYDEAQKIKEKHREEFPGWVYQPRPGKRKRFPLSVSNVLSGTTQNIISTNPTTIYPCCSPTYSVVIPSLQNTITHSVGEALPAIQLPPPAVQCPSPITLFQPSISSTAQVAVQAPSLPLCPPLPPQCFAGPSQMDTHQLHSGASCSVKRPTPVSLESTSRIPTSASTAHARFAASTIQPPKGYPSLSTCPRSAPIPQSPPIPHSHVCQPPPLGHAATLFGTPPRFSFHHPYFLPGPHYFPSSTCPYSRPPFGYGNFPSSVPECLGYYEDRYQKHEAMFSALNRDYPFRDYPDERAHSEDSRSCESVDGTSYCNSHIHSGEEYLNPVPQLDTGALESVFTAPTSTPSNIQQVNVTDSDEEEEEKVLRNL*