Part of scaffold_1034 (Scaffold)

For more information consult the page for scaffold_1034 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TIMD4 ENSTTRG00000000591 (Bottlenosed dolphin)

Gene Details

T-cell immunoglobulin and mucin domain containing 4

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000000554, Bottlenosed dolphin)

Protein Percentage 69.6%
cDNA percentage 79.12%
Ka/Ks Ratio 0.89761 (Ka = 0.2444, Ks = 0.2723)

TIMD4 ENSBTAG00000013185 (Cow)

Gene Details

T-cell immunoglobulin and mucin domain-containing protein 4 precursor

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000017547, Cow)

Protein Percentage 62.04%
cDNA percentage 70.56%
Ka/Ks Ratio 0.57152 (Ka = 0.333, Ks = 0.5827)

TIMD4  (Minke Whale)

Gene Details

T-cell immunoglobulin and mucin domain containing 4

External Links

Gene match (Identifier: BACU000774, Minke Whale)

Protein Percentage 78.1%
cDNA percentage 82.12%
Ka/Ks Ratio 0.92245 (Ka = 0.2042, Ks = 0.2214)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 822 bp    Location:573489..582808   Strand:+
>bmy_14771
GTTTTTGTTTGCCTCTTGGTTTGTTTTATTTTGCTGGGGGTCAAGCGTCCAGCTCCAGCTGCATCAGAAATTGTCGTGAGAGCGTTTTTGGGTCAGTCGGTGACTTTGCCCTGTATGTACTCATCCTGGTCTCCTAACAGCAACATCATGTGCTGGGGCAAAGGCCAGTGTCCCAACTCCAAATGCAATGACGAGCTTCTCTACACCAATGGGAAAAGGGTGGTCTCGAGGAAGTCGCCAAAATACCAACTTCTGGGGAATATCTGGAGAGGGGATATCTCCTTGACCATCTTCAACACCAACGAAGGTGACAGTGGTGTGTACTGCTGCCGCATAGAGGTGCCTGGCTGGTTCAACGATGTGAAGAAGAACATCCGCCTGGAGCTGAGGAGAGGTCCCACGACCACGCGCTCAACAACCACCCGTCGCCCAACCACCACCACCACCACCGCCGTGACGACAACCACAGCTGTGCTTCCAACAACCACAGTCGTGCCTACACCTGACCTGCCAGCCACACCACCGCTTCAGATGAGAACCACTGCTGCACTCCCCACCACGGCAGCCGCATGCCCTCTGACAACACAGGGCTCCCTTCATGAGGAAGACACGACACTTCTGACCCTTGAGCCTTCCACAGAAGGGCCCATCCTCACTGCAGTCAGCATTTTTGGTTCTCTAGTTGACCTCCCAGGAGTCTTGGGGACACTTAGTAAAGAACCAGGAAATGTCACCCTGGGTCAGACACCAGTTCCATCCTGCCGGGGCTTAAGTCCCTACTCAGGCATTAGAGATTGGTTGAGGAAAGGCCTCCAGATGCCT

Related Sequences

bmy_14771T0 Protein

Length: 274 aa      View alignments
>bmy_14771T0
VFVCLLVCFILLGVKRPAPAASEIVVRAFLGQSVTLPCMYSSWSPNSNIMCWGKGQCPNSKCNDELLYTNGKRVVSRKSPKYQLLGNIWRGDISLTIFNTNEGDSGVYCCRIEVPGWFNDVKKNIRLELRRGPTTTRSTTTRRPTTTTTTAVTTTTAVLPTTTVVPTPDLPATPPLQMRTTAALPTTAAACPLTTQGSLHEEDTTLLTLEPSTEGPILTAVSIFGSLVDLPGVLGTLSKEPGNVTLGQTPVPSCRGLSPYSGIRDWLRKGLQMP