Part of scaffold_1051 (Scaffold)

For more information consult the page for scaffold_1051 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CHFR ENSTTRG00000010659 (Bottlenosed dolphin)

Gene Details

checkpoint with forkhead and ring finger domains, E3 ubiquitin protein ligase

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000010106, Bottlenosed dolphin)

Protein Percentage 79.32%
cDNA percentage 80.88%
Ka/Ks Ratio 0.25898 (Ka = 0.0376, Ks = 0.1452)

CHFR ENSBTAG00000013951 (Cow)

Gene Details

E3 ubiquitin-protein ligase CHFR

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000018544, Cow)

Protein Percentage 90.64%
cDNA percentage 91.63%
Ka/Ks Ratio 0.16429 (Ka = 0.0482, Ks = 0.2934)

CHFR  (Minke Whale)

Gene Details

checkpoint with forkhead and ring finger domains, E3 ubiquitin protein ligase

External Links

Gene match (Identifier: BACU009014, Minke Whale)

Protein Percentage 87.16%
cDNA percentage 90.29%
Ka/Ks Ratio 0.4065 (Ka = 0.0831, Ks = 0.2045)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1569 bp    Location:354359..336050   Strand:-
>bmy_14781
ATGGAGCCCACCTCTGCAGGGCGAGGGCCTGCCTCCAGCTCCGGCTCGAGAGGTGCAGACGTCTCCCCAAAAGGGTGTGGTCCATCTGTGGCAAGTGATGAAATCACCAGCTTCCCTTTGGCTCTCTCTGAAAGAGAGGGGGCATCCTTTTCTCCGTCGGAACCCCAGGATCAGGAGGAGTTGGAGCCCGTTAAGAAGAGAGTAAAAGCAGACGGGGAGCCCGCCCTGAACCTGCCCATGCTGGTCGCAGACCCGGGCGGAGACCCCCACAGTGCCCTTGACGTCAGGGCCGCGACAGTGAAGCCAGACAAGATGGAGGAGACGCTCACGTGCATCATCTGCCAGGACCTGCTGCACGACTGTGTGAGCCTGCAGCCCTGTATGCACACCTTCTGCGCCGCCTGCTACTCGGGCTGGATGGAGCGCTCTGCCCTGTGCCCCACCTGCCGCTGTCCGGTGGAGCGGATCTGTAAAAACCACATCCTCAACAACCTGGTGGAGGCGTATCTGCTGCAGCACCCGGACAAGAGGCGCAGCGAGGAGGACCTGCGCAGCATGGCCGCCAGGAACAGGATCACGCAGGACATGCTGCAGCCCAAGGTCAGGAGGGCCTTCTCCGACGAGGAGGGGAGCTCCGAGGACCTGCTGGAGCTGTCAGACGTGGACAGCGAGTCCTCGGACGTCAGCCAGCCATACATCGTGTGCAGACAATGCCCCGAGTACCGCAGGCAGGCGGGGCGGCCCCTTCCCTGCCCAGGGCCCGGCAGTGAGCCAGGGGCACCGCAGGCCCCTGGGGATGCACCATCGACGTCCGTCAGCATCACGACAGCCCAGGACTACGTGTGCGCCCTGCAAGGAAGCCACGCCATATGCACCTGCTGCTTCCAGCCCATGCCCGACCGGAGGGCGGAGCGCGAGCGGGACCCCCGCATCGCCCCCCAGCAGTGTGCCATCTGCCTGCAGCCCTTCTGCCACCTGTACTGGGGCTGCGCCCGGACCGGCTGCCTCGGCTGTCTGGCCCCGTTCTGCGAACTCAACCTGGGCGACCGGTGTCTGGATGGGGTGCTGAGCAACAACAACTACGAGTCGGACGTGCTGAAGAATTATTTGGCCACCAGGGGTTTGACGTGGAAAAACATGTTGACTGAGAGCCTCGGGGCTCTACAGAGGGGAGCGTTCCTGCTGTCTGATCACAGAATCACCGGGAACACCGTGCTGTGCTACTGCTGTGGCCTGCGGAGCTTCCGCGAGCTGACCTACCAGTATCGGCAGAACATCCCTGCTTCCGAGCTGCCGGTGGCCGTAACGTCCCGTCCTGATTGCTACTGGGGCCGCAACTGCCGCACTCAGGTGAAGGCCCACCACGCAATGAATACGATTTTCAACTTTGTGTTGCTCTTGATACAGACTCTGAGAAGCAGCGCTCCGTGGAAGAAGGCCTCCTTCCTGCGTTCTAATAAACAAGCCGTGTCTGTTTCTCTCCCCGGCATGTTCGCTCGTGTGTTGGTTGTGATGTGCCCCTTCCTGTCACGGTGCGAGCGGCTGCAGGCGTCGCTTATTACCTGCTGA

Related Sequences

bmy_14781T0 Protein

Length: 523 aa      View alignments
>bmy_14781T0
MEPTSAGRGPASSSGSRGADVSPKGCGPSVASDEITSFPLALSEREGASFSPSEPQDQEELEPVKKRVKADGEPALNLPMLVADPGGDPHSALDVRAATVKPDKMEETLTCIICQDLLHDCVSLQPCMHTFCAACYSGWMERSALCPTCRCPVERICKNHILNNLVEAYLLQHPDKRRSEEDLRSMAARNRITQDMLQPKVRRAFSDEEGSSEDLLELSDVDSESSDVSQPYIVCRQCPEYRRQAGRPLPCPGPGSEPGAPQAPGDAPSTSVSITTAQDYVCALQGSHAICTCCFQPMPDRRAERERDPRIAPQQCAICLQPFCHLYWGCARTGCLGCLAPFCELNLGDRCLDGVLSNNNYESDVLKNYLATRGLTWKNMLTESLGALQRGAFLLSDHRITGNTVLCYCCGLRSFRELTYQYRQNIPASELPVAVTSRPDCYWGRNCRTQVKAHHAMNTIFNFVLLLIQTLRSSAPWKKASFLRSNKQAVSVSLPGMFARVLVVMCPFLSRCERLQASLITC*