Sequence detailsbmy_14793 (Coding sequence)

Part of scaffold_1074 (SequenceType object (1))

For more information consult the page for scaffold_1074 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CAPN10ENSTTRG00000000135 (Bottlenosed dolphin)

Gene Details

calpain 10

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000000127, Bottlenosed dolphin)

Protein Percentage 96.08%
cDNA percentage 97.17%
Ka/Ks Ratio 0.18956 (Ka = 0.0167, Ks = 0.088)

CAPN10ENSBTAG00000002809 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000003637, Cow)

Protein Percentage 91.2%
cDNA percentage 92.44%
Ka/Ks Ratio 0.14056 (Ka = 0.0406, Ks = 0.289)

Additional orthologs identified in other species via the OPTIC pipeline.

CAPN10 (Human)   Capn10 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 2016 bp    Location:230987..218832   Strand:-
Raw sequence 
>bmy_14793
CGGGAGGAAATCACGTGGAGGCGGCCCCAGGAAATCTGCGCCACGCCCCAGCTGTTTGCAGATCGCGCTCAGGAAGGGCAGGTGAAGCAAGGGCTGCTAGGGGACTGCTGGTTCCTGTGCGCCTGCGCCGCCCTGCAGAAGAGCCAGCACCTCCTGGACCAGGTCTTTCCTCCGGGACAGCCGAGCTGGCTCGACCAGACGTACCACGGCTCCTTCACCTGTCGAGTTTGGCAGTTTGGACGCTGGGTGGAGGTGACCATAGATGACCGTCTGCCTTGTCTTGCAGGGAGACTCTGCTTCTCCCGGTGCCAGAGGGAGGATGTGTTCTGGCTTCCCTTACTGGAGAAGGTCTACGCCAAGGTCTACGGGTCCTATGAGCACCTGTGGGCGGGACAGGTGGCTGACGCCCTGGTGGACCTCACTGGTGGCCTGGCCGAAAGGTGGAACCTGAAGGACATGGCAGGAACCAGCGGCCAGCGGGACAGGCCCAGGGGCGCGGAACGTAGGACTTGTCGGCAGCTGCTCAGCCTGAAGGACCGCTGTCTGCTGAGCTGCTCGGTGCTCAGCCCCAGAACAGGTACCAGGGCGCTGGGGGAGTTTCACGCTTTCATCGTCTCGGATCTGCAAGAGCTCCGGGGTCGGGCTGGTCAGAGCATCCTGCTGCTGCGGATTCAGAACCCCTGGGGCCGGCGGTGCTGGCAGGGGCCCTGGAGAGAGGGGGGTGAAGGGTGGAGCCGGGTGGAGTCGGCGGCCCAGTCTGAGCTGCTGTTGCAGCTGCAGGAGGGGGAGTTCTGGGTGGAGGAGGACGAGTTTCTGCGGGAGTTTGACGAGGTCACCATTGGCTTCCCCATCACGGAGGCTGGCCACCTGCAGAGCCTCTACTCAGGAAGGGCACTGTGCCACACTCAGGAGCTGCCCGGGGCCTGGGTCAAGGGCCAGTCGGCAGGAGGCTGCCGGAACAACAGCGGCTTCCCCAGCAACCCCAAGTTCTGGCTGCGGGTCTGCGAACCTAGCGAGGTATACGTGGCCGTCCTGCAGAGACCGCAGCTGCGCACGGCGGGCCACCCAGGCAGGGACTACCAGGCCGTGGGCCTGCACCTCTGGAAGGTGGAGAAGCGGCGGGTCAGCCTGCCCAGGGCCCTGTCCGCGCCCCCCGTGGCGGGCACCGCGTGCCACGCGTACGACCGTGAGGTCCACCTGCGCTGTGAGCTCTCCCCGGGCTACTACCTGGCCGTGCCCAGCACCTTCCTGAAGGACGTGCCAGGGCAGTTCCTGCTCCGGGTCTTCTCCAGCGGGAGAGTTTCCCTCAGCGCCATCCAGCCGGCAGCCCAGAGCGCTGCCCCCAGGGAGGCCCTGCCCGTGGGCGAGTGGGAGACCGTGAGGCTGCGGGGCTTCTGGAGAGTCGGCCGGACGGCGGGGGGCAGCCGGAACTTTGCCTCCTACCCCGCCAACCCCCGCTTCCCCCTCTCGGTGCCGGAGGGCGCGGGCCCCCGCTGCGTCCGCATCACCCTACGCCAGCACAGCCGTGACCACGAGGGCCTCCCCATCGGCTTCCACGTCTTCCAGGCAGGCGCCCCTGCTCCCGGGCGTCCGGGTGGGGTGAGCCGGGGTCGGGGCGGGAGGCCCCCCCGGGGTCTGTCTGCGTCATCCAGTCACACGCAAGACTCATTTCTAGGTTTCCTAAACCGATTTGGTCCACCCGCGGGCAGGCCGCCCGGTCTGAGCCTGGGCCTCCCCCAGGTCCCAGCGGACGGCGGGGGCCGGGATGCGCCCTCCTTGCTGCTCCAGGAGCCTCTGCTGAGCTGTGTGCCGCACTGCTACGCCCAGGAGGTCAGCCGGCTCTGCCACCTGTCCGAGGGGACCTATTGGATCGTGCCCTCCACCTACCTGCCGGACACAGAGGGGGCCTTCACAGTGACCGTAGAGACCAGAATAGACAGGCGCTCCATTCACAGCCAGGAGATGCTGGGGCAGCTCCTCGAGGAGGCCTCCTTCGTGGCAGTGATGAAAGCCTAA

Related Sequences

bmy_14793T0 SequenceType object (3)

Length: 672 aa      View alignments
>bmy_14793T0
REEITWRRPQEICATPQLFADRAQEGQVKQGLLGDCWFLCACAALQKSQHLLDQVFPPGQPSWLDQTYHGSFTCRVWQFGRWVEVTIDDRLPCLAGRLCFSRCQREDVFWLPLLEKVYAKVYGSYEHLWAGQVADALVDLTGGLAERWNLKDMAGTSGQRDRPRGAERRTCRQLLSLKDRCLLSCSVLSPRTGTRALGEFHAFIVSDLQELRGRAGQSILLLRIQNPWGRRCWQGPWREGGEGWSRVESAAQSELLLQLQEGEFWVEEDEFLREFDEVTIGFPITEAGHLQSLYSGRALCHTQELPGAWVKGQSAGGCRNNSGFPSNPKFWLRVCEPSEVYVAVLQRPQLRTAGHPGRDYQAVGLHLWKVEKRRVSLPRALSAPPVAGTACHAYDREVHLRCELSPGYYLAVPSTFLKDVPGQFLLRVFSSGRVSLSAIQPAAQSAAPREALPVGEWETVRLRGFWRVGRTAGGSRNFASYPANPRFPLSVPEGAGPRCVRITLRQHSRDHEGLPIGFHVFQAGAPAPGRPGGVSRGRGGRPPRGLSASSSHTQDSFLGFLNRFGPPAGRPPGLSLGLPQVPADGGGRDAPSLLLQEPLLSCVPHCYAQEVSRLCHLSEGTYWIVPSTYLPDTEGAFTVTVETRIDRRSIHSQEMLGQLLEEASFVAVMKA*