Sequence detailsbmy_14797 (Coding sequence)

Part of scaffold_1074 (SequenceType object (1))

For more information consult the page for scaffold_1074 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

GPC1ENSTTRG00000010126 (Bottlenosed dolphin)

Gene Details

glypican 1

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000009601, Bottlenosed dolphin)

Protein Percentage 95.48%
cDNA percentage 95.71%
Ka/Ks Ratio 0.08312 (Ka = 0.0221, Ks = 0.2664)

GPC1ENSBTAG00000015996 (Cow)

Gene Details

Glypican-1 Secreted glypican-1

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000018329, Cow)

Protein Percentage 91.43%
cDNA percentage 91.59%
Ka/Ks Ratio 0.0704 (Ka = 0.0431, Ks = 0.6117)

Additional orthologs identified in other species via the OPTIC pipeline.

GPC1 (Human)   Gpc1 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1263 bp    Location:298796..291090   Strand:-
Raw sequence 
>bmy_14797
ATGGAGGAGAAGCTGGCCAACCGCAGCCGCGCCGAGCTGGAGACGGCGCTCCTGGACAGCGGCCGGGCCCTGCAGGCCACGCTGGCCGCCCAGCTGCGGGGCTTTGACGATCACTTCCAGCGCCTGCTGAACGACTCGGAGCGGGCGCTGCAGGAGGCCTTCCCGGGCGCTTTCGGAGAGCTGTACGTGCAGAACGCCAAGGCCTTCCGCGACCTGTATACCGAGCTGCGCCTCTACTACCGTGGCGCCAACCTGCACCTGGAGGAGACGCTGGCCGAGTTCTGGGCCCGCCTGCTCGAGCGCCTCTTCCGGCAGCTGCACCCGCAGCTGCTGCTGCCCGACGACTACCTGGACTGCCTGGGCAAGCAGGCCGAGCCGCTGCGGCCCTTCGGCGAGGCCCCCCGCGAGCTGCGCCTGCGCGCCACCCGCGCCTTCGTGGCGGCGCGCGCCTTTGTGCAGGGCCTGGGCGTGGCCAGCGACGTGGTCCGGAAGGTGGCCCAGGTGCCCCTGAGCCCGGAGTGCTCACGGTCTGTCATGAAGCTGGTGTACTGCGCCCACTGCCTGGGGGTGCCCGGCGCCCGGCCCTGCCCCGACTACTGCCGCAACGTGCTCAAGGGCTGCCTGGCCAACCAGGCCGACCTGGACGCCGAGTGGAGGAACCTTCTGGACTCCATGGTGCTCATCACAGACAAGTTCTGGGGCCCGACGGGCGCAGAGAGCGTCGTCGGCGGCGTGCACTTGTGGCTGGCAGAGGCCATCGGCGCCCTACAGGACAGCAGCGACACCCTGACGGCCAAGGTCATCCAGGGCTGCGGGAACCCCAAGGTGAACCCCCAGGGCCCTGAGCCCGAGGAGAAGCGGCGCCGGGGCAAGCTGGCGCTGCCGGAGAAGCCGCCCACGGGCACGCTGCAGAAGCTGGTCTCCGAGGCCAAGGCCCAGCTCCGAGATGCCCAGGACTTCTGGATCAGCCTCCCGGGGACGCTGTGCAGTGAGAAGTTGGCCATGAGCGCGGCCAGCGATGACCGCTGCTGGAACGGGGTGGCCAAGGGTCGGTACCTCCCCGAGGTGATGGGCGATGGCCTGGCCAACCAGATCAACAACCCCGAGGTGGAGGTGGACATCACCAAGCCCGACATGACCATCCGCCAGCAGATCATGCAGCTGAAGATCATGACCAACCGTCTGCGCGGCGCCTACAATGGCAACGACGTGGACTTCCAGGACGCCAGTGAGAGCGCGGCCCCGGGTGGGCCTGGGGGCTGA

Related Sequences

bmy_14797T0 SequenceType object (3)

Length: 421 aa      View alignments
>bmy_14797T0
MEEKLANRSRAELETALLDSGRALQATLAAQLRGFDDHFQRLLNDSERALQEAFPGAFGELYVQNAKAFRDLYTELRLYYRGANLHLEETLAEFWARLLERLFRQLHPQLLLPDDYLDCLGKQAEPLRPFGEAPRELRLRATRAFVAARAFVQGLGVASDVVRKVAQVPLSPECSRSVMKLVYCAHCLGVPGARPCPDYCRNVLKGCLANQADLDAEWRNLLDSMVLITDKFWGPTGAESVVGGVHLWLAEAIGALQDSSDTLTAKVIQGCGNPKVNPQGPEPEEKRRRGKLALPEKPPTGTLQKLVSEAKAQLRDAQDFWISLPGTLCSEKLAMSAASDDRCWNGVAKGRYLPEVMGDGLANQINNPEVEVDITKPDMTIRQQIMQLKIMTNRLRGAYNGNDVDFQDASESAAPGGPGG*