Part of scaffold_1053 (Scaffold)

For more information consult the page for scaffold_1053 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SNAPC4 ENSTTRG00000007574 (Bottlenosed dolphin)

Gene Details

small nuclear RNA activating complex, polypeptide 4, 190kDa

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000007166, Bottlenosed dolphin)

Protein Percentage 66.19%
cDNA percentage 73.29%
Ka/Ks Ratio 0.49962 (Ka = 0.1713, Ks = 0.3429)

SNAPC4 ENSBTAG00000000054 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000000060, Cow)

Protein Percentage 57.69%
cDNA percentage 68.2%
Ka/Ks Ratio 0.35643 (Ka = 0.3445, Ks = 0.9665)

SNAPC4  (Minke Whale)

Gene Details

small nuclear RNA activating complex, polypeptide 4, 190kDa

External Links

Gene match (Identifier: BACU016134, Minke Whale)

Protein Percentage 84.19%
cDNA percentage 88.77%
Ka/Ks Ratio 0.63735 (Ka = 0.1104, Ks = 0.1732)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 3984 bp    Location:105816..80614   Strand:-
>bmy_14806
ATGGATATAGATGCTGAAAGAGTCAGAATATCGAAGGAGATCAGGGAGTTGGAAAGGATTCTGGATCCCAGCTCTTCGAGTATCAACGTGGACGTCTCGGAGTCAAGTCTCGACTCGGATTCCGACGCAGGGAAGACCTGGGAAAAGGTCCTGCTCAGAAAGTCCGTGGTGAGCGACCGCCTGCAGCGTCTGCTCCAGCCCAAGTTACTCAAGCTCGAGTATTTGCAGCAGAAACAGAGGAGCAGCACGAGTGAGGTGGAGAGGCAGGTCCTGGAGAAGCAGGCCAGGGAGGCTGAGAAGGAGGTGCAGGACATCAATCAGCTCCCCGAGGAGGCCCTGCTGGGCGACAGGCTGGACGACCACGACTGGGAGAAGATCTCCAACGTCAACGTGAGCTGGGGCGGCTCTGTCCCGGAAGCTGGGGTGGGGGTCAGCACCGGGCAGCGAGGCCGAGACCCGCGTGCCCACCAGACCTGCCGCGACCCTCTCCGGTCAAGTGCGTGTCCACAGCGTGGGGTGGTTTTCGGGGCCCTCCCTGCTGGCACGTCTCGGCACCCTAGACGGAGCCCCCAGGCCCCGCAGCCCGGCAGCCCCTGTCAGGGCCGCGGCCCCGCAGACAGCTCTCTGTGTGTGCAGTTCGAGGGCAGCCGCGGCGCACAGGAGATCCGCCGGTTCTGGCAGAACTGCGAGCACCCGAGCATCAACAAGCAGGCGTGGAGCGCGCAGGAGGTCGAGCAGCTGAAGAGCGTCGCGGCCAGGCACGGCCACCTGGACTGGCAGAGGATCGCCAAGGAGCTGGGGGTGAGGGCTGCAGGGCCCGGGCGGCGTCGGGGGTCTGCGGGCTGCACGTCGCGCCGCGGCCAGGGTCGTCCCTTGGAGCTGTCGGAGGGTCACTGGGCAAAAATAGCCTCTGAACTGCCCCATCGGACGGGCTCCCAGTGCCTAAGCAAGTGGAAACTCATGGTCAGGAAGCGGCAGCGGCGCAGGCGGGGGCGGCGGCCCCCCCGCAGGGTGCGGTGGAGCTCCAGCAGCGGGGACAGCGGCACCACCAGCGGGGACATCAGCACCAGCGAGGCCAGCGAGGACTCGGAGCCAGAGGCGGCCCCGGGGGCCCTGGCAGGTGGCCAGGCGCTGCTGCCAGCACAGCATGCGGTGCCTGACGTGGACCTGTGGGTTCCCGCCCGGCAGAGCGCCAGGGAGCTGTGGGGAGGGGGCGCCGGGAGCTGGCCAGGACCCTGTGATGCCTGCCCGCGCCCTCCCGAGGGCTCCGACGCGGCCCAGGGTGGCCGCTGGGAAGCTTGCGCCACGGCCTCAGCCCCAGCAGAGCCGGCGGGCCAGGCGCGGGCCCCCTCCGGGACCCAGAGCACCAGCCTGAGAGGCGTCAGATGGCCGTGCTCGGCGGACGCTCGCCCCTCGAGCTCCATGGGGCCGGCGCGCCAGGGCGCAGGTGCGGGGCACTTTGGGGTCTGGGCAGGGAGCCGTGCGTGCGCCCAAAAGCAGCAGCCTCCCGTGGTCTGTCAGGGTGGGGACGTCCACTCGGGGTCCCTGGAGACAGCGCTGCAGGCGCTCAGACCAACGTGGCCACTTGGTGCCAGACGCGGCGCCCCAGGCGGCCAAGACCACCCCGATGCCCACCACCCGTCTCGTCTCCCATCCCCGCCCCACTCTGGCACCCAGCAGGAGTGGAGGGTGAAGGATCTGAGGCAGCCGCACCTGCGCAGCGCGGCCCCAGGGCCCACCCCTGGTGGCGGCGGTGGCAGGGGCGGGGCCAGGCCCTGCGTGCGGCCGCTGTGGCACAGGACCAGGCAGCGGCGCCAGGGACACGCCCTGCAGAGGAGGCTCCTTGAACACCAGCTTCTGACGGCCGTGAGCCCGTGGGTGGGCGAGGCTGCCCTGCCACCCGCCCTGCCACCCGCTCCCCGGAGGCCCGCCGTGGCGCACCGTCGAGCTGACGGCATCAGGAGGCGGCTGCAGGGCGCCCACCTGGCCAGCACCCCGGTGTTCACCCTCTTCATTCAGTTGTTCCAGATCGACACAGCTGGCTGCATGGAGGTCGTCCGGGAGAGGAAGGCCCGGCCGCCCACCCTGCTCCAGGCTGGTGCCCGGGACTCGCCGCCCCTGCAGAGCGTGCCGGCCCGAGGAGCTGCGAAGAAGAGCACCTGCTACACGGGGAGTGGAGGGCCGCAGGCCTGCCACGCGGAGTCCATGCCGCGGGCACCCCCGCAGGCTCCGTGCGGACCCCGGCCCAAGCCCAAAACTGTGTCTGAGCTGCTTCGGGAGAAGCGGCTGCGGGAGGCCCGAGCCAGGAAGGCTGCCCAGGGCCCTGCGGTCCTCCCGCCCCAGGTGCTGGTCTCCTCGCCTGTGGTCTTCCAGCCGCTGGCCCCCCAAGGCTCCCCAGTCTCCAGTGCCGTGCTCTCTGGGCCTGGGGGCCCTGTAGCGGCCGGTTCAAGTGCGTTAGGCTCTTGGGCCTCAGCCATGGAGGAGAGACCCCTGACGCTGCAAGCCTTTGCCCTCGCTCCGGCCTCCACAGGAGCCTTGAAGGCCCCGGCTGCCCCTGCCGCCTCCAGGGCCCCAGGTCTGGGCCCCGGCCAGGTCCCTGTGAGCTGCCGGCCAAGCAGTCTCGGACAGTCTCAGGCCCCCGCCACGTCCCGGAAGCCGGGCGTGCCCGAGGCGCCACCCTTTCTCCCTGCAGCCCCCAGCCCCGTTCAGCTGCCTATCCAGCCCCTCAGCCTGACGCCAGCTCTGGGCACGCACACGGCAGCCAGCACCCCTCTGCCTGTCACCTGGGTGCTCACAGCCCAGGGGCTGCTCTCTGTGCCTGTGCAGGCGATGGTGGGCCTTCCGAGGCCAACAGGGACTCCTGACCCCCACGGGTTATCGGTGACTCTGCTGCCCTCCCCGACTGCGACTCAGGCAGGCCAGGGCCCCAGGCTCCCTGGGCAGGGCCACCCTTGGCAGCCCCCAACCAACACGGACACAGAATCAGACCCTGCCTCCAGGACAGAGCTCTTGACCCTTCCGACGCACCCCACATCCCAGAGCCTTGCGGAGGTGGACATGGCCCATGACCCTGGGGGACTCTCCCCTGGAGAGGCCCAAGTGGCGGGGGGGACATCTGTACCCAGGACATCCTCCCAGGCTACGCCCCTGGCTGACGACTCTGAAGCAGGGCCCTCAGGTCCAAGGGAGCCCAGGAGGCCTTTGGGCCTGGAGAGGCCGCCCCCGCCCTGGTCCGGGCCTGGGAAGAGCGCCCTGGACTTGGGCCTCCTCTCCCAGGAGAGCGAGGCAGCTGTGCGGGAGTGGCTGAGGGGGCAGCGAGGGGTGCATGTGCCCCCCCTGGGCAGCAGGCTGTCCTACCAGCCCCCCACGCTGTGCAGCCTGCGGGCACTGTCTGGCCTCCTGCTCCGCAAGAAGGCCTTGGAGCACAGAGCCAGCTCCCTGGTGCCCAGCGGGGCAGCCGGGGCCCTGCAGGCCTCGCTGCGGCGGGTGCGTGAGCGGCTGCGGGGCAGCCCCGCCTACCTGCTGCTGAGGGTGCGCTTCCTGGCGTCCTTCGCCCTCCCGGCGCTCCTGGCCACCCTCTCCCCCCGCGGCGTCCCCACCACCCTGTCGGTGGCCATGAGGTCCAACCCTGGGAGTGACAGTGACGACAGCTACCTGGGGGAGCTGGAGCTCGTGGACGGGCAGCCAGGGGGCTCGGCCGGCGGTCCCCAGGTGGCCGCCGTGCCCGCTCAGGGAACGCCACACCCCGGACAGGCCTCTGCCCCCTCCTGCCCGGACGGTCCTGATGACCTTGACGTGCTCCAGACACGGCACGCCCGGCATGCCCGGAAGCGGAGGAGGCTGGAGACTTCACAGGGCCGGACAGCCACTGCTGCTGCCGACAGGAGGTGGGGCTCGTGCTGGACCCAGGCGAGCCTGCCCACCCCGGGAGGCTGGCACCCAGCCCGCGGCAGAAGGGCTCTGCCAGCAGTGGCCGCGTCGTGA

Related Sequences

bmy_14806T0 Protein

Length: 1328 aa      View alignments
>bmy_14806T0
MDIDAERVRISKEIRELERILDPSSSSINVDVSESSLDSDSDAGKTWEKVLLRKSVVSDRLQRLLQPKLLKLEYLQQKQRSSTSEVERQVLEKQAREAEKEVQDINQLPEEALLGDRLDDHDWEKISNVNVSWGGSVPEAGVGVSTGQRGRDPRAHQTCRDPLRSSACPQRGVVFGALPAGTSRHPRRSPQAPQPGSPCQGRGPADSSLCVQFEGSRGAQEIRRFWQNCEHPSINKQAWSAQEVEQLKSVAARHGHLDWQRIAKELGVRAAGPGRRRGSAGCTSRRGQGRPLELSEGHWAKIASELPHRTGSQCLSKWKLMVRKRQRRRRGRRPPRRVRWSSSSGDSGTTSGDISTSEASEDSEPEAAPGALAGGQALLPAQHAVPDVDLWVPARQSARELWGGGAGSWPGPCDACPRPPEGSDAAQGGRWEACATASAPAEPAGQARAPSGTQSTSLRGVRWPCSADARPSSSMGPARQGAGAGHFGVWAGSRACAQKQQPPVVCQGGDVHSGSLETALQALRPTWPLGARRGAPGGQDHPDAHHPSRLPSPPHSGTQQEWRVKDLRQPHLRSAAPGPTPGGGGGRGGARPCVRPLWHRTRQRRQGHALQRRLLEHQLLTAVSPWVGEAALPPALPPAPRRPAVAHRRADGIRRRLQGAHLASTPVFTLFIQLFQIDTAGCMEVVRERKARPPTLLQAGARDSPPLQSVPARGAAKKSTCYTGSGGPQACHAESMPRAPPQAPCGPRPKPKTVSELLREKRLREARARKAAQGPAVLPPQVLVSSPVVFQPLAPQGSPVSSAVLSGPGGPVAAGSSALGSWASAMEERPLTLQAFALAPASTGALKAPAAPAASRAPGLGPGQVPVSCRPSSLGQSQAPATSRKPGVPEAPPFLPAAPSPVQLPIQPLSLTPALGTHTAASTPLPVTWVLTAQGLLSVPVQAMVGLPRPTGTPDPHGLSVTLLPSPTATQAGQGPRLPGQGHPWQPPTNTDTESDPASRTELLTLPTHPTSQSLAEVDMAHDPGGLSPGEAQVAGGTSVPRTSSQATPLADDSEAGPSGPREPRRPLGLERPPPPWSGPGKSALDLGLLSQESEAAVREWLRGQRGVHVPPLGSRLSYQPPTLCSLRALSGLLLRKKALEHRASSLVPSGAAGALQASLRRVRERLRGSPAYLLLRVRFLASFALPALLATLSPRGVPTTLSVAMRSNPGSDSDDSYLGELELVDGQPGGSAGGPQVAAVPAQGTPHPGQASAPSCPDGPDDLDVLQTRHARHARKRRRLETSQGRTATAAADRRWGSCWTQASLPTPGGWHPARGRRALPAVAAS*