Part of scaffold_1053 (Scaffold)

For more information consult the page for scaffold_1053 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TRAF2 ENSTTRG00000002669 (Bottlenosed dolphin)

Gene Details

TNF receptor-associated factor 2

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000002504, Bottlenosed dolphin)

Protein Percentage 96.42%
cDNA percentage 96.18%
Ka/Ks Ratio 0.07673 (Ka = 0.0171, Ks = 0.2231)

TRAF2 ENSBTAG00000010497 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000013869, Cow)

Protein Percentage 91.72%
cDNA percentage 91.61%
Ka/Ks Ratio 0.04338 (Ka = 0.0357, Ks = 0.8219)

TRAF2  (Minke Whale)

Gene Details

TNF receptor-associated factor 2

External Links

Gene match (Identifier: BACU016115, Minke Whale)

Protein Percentage 69.93%
cDNA percentage 78.6%
Ka/Ks Ratio 0.30361 (Ka = 0.2134, Ks = 0.7029)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 891 bp    Location:510781..524297   Strand:+
>bmy_14826
ATGGTGGAGGGCGAGAGGCTGCAGGAGCACGAGGCGCAGCGGCTCCGGGAGCACCTGGCCCTGCTGCTGGGCGTCCTGCAGGCCGGGCCCCCCCCAGGAGACGGCCGCCCCCTCCTCGGCCAGGGCGAGCAGGGCTGGGGGGCCAGCACGCCGGGCCCGGGGGCAGCGCCCTCCACGGCGGCGGAGCTGCTGCAGCGGTGCGAGGCCCTGGAGCGGAAGACGGCCACCTTCGAGAATATCGTCTGCGTGCTGAACCGGGAGGTGGAGCGGGTGGCCATGACTGCCGAGGCCTGCGGCCGGCAGCACCGGCTGGACCAAGACAGGATCGAAGCCCTGAGTAATAAGGTGCAGCAGCTGGAGAGGAGCATCGGCCTGAAGGACCTGGCCATGGCTGACCTGGAGCAGAAGGTCCACGAGATGGAGGCGTCCACCTTCGACGGGGTGTTCATCTGGAAGATCCCCGACTTCGCCAGGAAGCGCCAGGAAGCCGTGGCCGGCCGCACGCCCGCCATCTTCTCCCCAGCCTTCTACACCAGCAGGTACGGCTACAAGATGTGTCTGCGCGCCTACCTGAACGGAGATGGCACCGGGCGCGGGACGCACCTGTCCCTCTTCTTCGTTCTGATGAAGGGCCCCCACGACGCCCTCCTGCGCTGGCCCTTCAACCAGAAGGTGACCCTGATGTTGCTGGACCAGAACAACCGGGAGCACGTGATTGACGCCTTCAGGCCTGACGTGACCTCGTCCTCTTTCCAGAGGCCGGTCAGCGACATGAACATCGCGAGCGGCTGCCCGCTCTTCTGCCCCGTCTCCAAGATGGAGGCCAAGAATTCCTACGTGCGTGACGACGCCATCTTCATCAAGGCCATAGTGGACCTGACAGGGCTCTAG

Related Sequences

bmy_14826T0 Protein

Length: 297 aa      View alignments
>bmy_14826T0
MVEGERLQEHEAQRLREHLALLLGVLQAGPPPGDGRPLLGQGEQGWGASTPGPGAAPSTAAELLQRCEALERKTATFENIVCVLNREVERVAMTAEACGRQHRLDQDRIEALSNKVQQLERSIGLKDLAMADLEQKVHEMEASTFDGVFIWKIPDFARKRQEAVAGRTPAIFSPAFYTSRYGYKMCLRAYLNGDGTGRGTHLSLFFVLMKGPHDALLRWPFNQKVTLMLLDQNNREHVIDAFRPDVTSSSFQRPVSDMNIASGCPLFCPVSKMEAKNSYVRDDAIFIKAIVDLTGL*