Part of scaffold_1038 (Scaffold)

For more information consult the page for scaffold_1038 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SLC6A20 ENSTTRG00000010381 (Bottlenosed dolphin)

Gene Details

solute carrier family 6 (proline IMINO transporter), member 20

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000009843, Bottlenosed dolphin)

Protein Percentage 75.51%
cDNA percentage 75.75%
Ka/Ks Ratio 0.08375 (Ka = 0.0087, Ks = 0.104)

SLC6A20 ENSBTAG00000031340 (Cow)

Gene Details

sodium- and chloride-dependent transporter XTRP3

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000041891, Cow)

Protein Percentage 93.74%
cDNA percentage 92.45%
Ka/Ks Ratio 0.0656 (Ka = 0.0292, Ks = 0.4458)

SLC6A20  (Minke Whale)

Gene Details

solute carrier family 6 (proline IMINO transporter), member 20

External Links

Gene match (Identifier: BACU002458, Minke Whale)

Protein Percentage 98.9%
cDNA percentage 98.77%
Ka/Ks Ratio 0.08591 (Ka = 0.0046, Ks = 0.0533)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1632 bp    Location:345856..316552   Strand:-
>bmy_14851
ATGCTCACCGTGGAGGGCATGCCGCTCCTGTACCTGGAACTGGCAGTGGGGCAGCGCATGCGCCAGGGCAGCATCGGCGCCTGGAGGACCATCAGCCCCTACCTCAGTGGCGTTGGCGTGGCCAGTGTGGTGGTGTCCTTCTTCCTCTCCATGTACTACAATGTCATCAACGCCTGGGCCTTCTGGTACCTCTTCCACTCCTTCCAGGATCCCCTGCCGTGGTCCGTGTGCCCACTGAATGGCAACCGTACGGGCTACGATGAGGAGTGTGAGAAGGCTTCCTCGACACAGTACTTCTGGTACCGGAAAACCCTCAACATCTCGCCATCCATCCAGGAGAGCGGGGCGGTGCAGTGGGAGCCGGCGCTGTGCCTCATCCTGGCCTGGCTCCTGGTGTACTTGTGTATCCTGCGGGGCACGGAGTCCACCGGCAAGGTGGTGTACTTCACTGCGTTGCTGCCCTACTGCGTGCTCATCATCTACCTGGTCAGGGGCCTCACGCTCCACGGAGCCACCAACGGCCTGGCATACATGTTCACTCCCAAGATGGAGCAGCTGGCCAACCCCAAGGCCTGGATCAACGCAGCCACCCAGATCTTCTTCTCACTCGGCTTGGGGTTCGGCAGCCTCATCGCCTTCGCCAGCTATAACGAGCCCTCCAACAACTGCCAGAAGCACGCCGTCATCGTGTCCATCATCAACAGCTTCACCTCCATCTTTGCCAGCGTCGTCACCTTCTCCATCTATGGCTTCAAGGCCACCTTCAACTACGAAAGCTGCTTGAACAAGGTGATTCTGCTGCTGACCAATTCTTTCGACCTTGAAGATGGCTTTTTGACAGTCAGCAACCTGGAGGAAGTGAAAAGTTACCTGGCGTCTGCCTACCCCAGCAAGTACAGCGAGGTGTTCCCACAGATTAAAAACTGCAGCTTGGAATCGGAGCTGGAAACGGCTGTCCAGGGCACCGGCCTGGCCTTCATCGTCTACACAGAGGCCATTAAAAACATGGAGGTGTCCCAGCTGTGGTCGGTGCTCTACTTCTTCATGCTGCTGATGCTGGGCATTGGAAGCATGCTGGGGAACACGGCCGCCATCCTCACCCCTCTGACCGACAGCAAGGTCATCTCCAGCTACCTGCCCAAGGAGGCAATCTCAGGTCTGGTGTGCCTCGTCAACTGTGCCATCGGCTTGGTGTTCACCATGGAGGCCGGCAACTACTGGTTCGACATCTTCAACGACTACGCTGCCACGCTGTCCCTGCTGCTCATTGTCCTGGTGGAGACGGTCGCCGTGTGTTACCTGTACGGACTGAGGCGATTCGAAAGCGACCTGAAGGCTATGACTGGACACGCTCTGAACTGGTACTGGAAGGCCATGTGGGGCGGTGTGAGCCCGCTGCTCATCATCAGCCTCTTTGTCTTCTACCTGAGTGACTACATCATCACGGGGACCCTGCAGTACCAAGCCTGGGACGCCTCCCAGGGCCAGCTTGTGACCAAGGACTACCCCCCGTATGCACTGGCCATCATTGGGCTGCTCGTGGCCTCCTCTACCATGTGCATCCCCCTGGGGGCCCTGGGGACTTTCATCGTGCGCCACCTCAAGCGGGGAGACACAGCCTCCGTGGCCTGA

Related Sequences

bmy_14851T0 Protein

Length: 544 aa      View alignments
>bmy_14851T0
MLTVEGMPLLYLELAVGQRMRQGSIGAWRTISPYLSGVGVASVVVSFFLSMYYNVINAWAFWYLFHSFQDPLPWSVCPLNGNRTGYDEECEKASSTQYFWYRKTLNISPSIQESGAVQWEPALCLILAWLLVYLCILRGTESTGKVVYFTALLPYCVLIIYLVRGLTLHGATNGLAYMFTPKMEQLANPKAWINAATQIFFSLGLGFGSLIAFASYNEPSNNCQKHAVIVSIINSFTSIFASVVTFSIYGFKATFNYESCLNKVILLLTNSFDLEDGFLTVSNLEEVKSYLASAYPSKYSEVFPQIKNCSLESELETAVQGTGLAFIVYTEAIKNMEVSQLWSVLYFFMLLMLGIGSMLGNTAAILTPLTDSKVISSYLPKEAISGLVCLVNCAIGLVFTMEAGNYWFDIFNDYAATLSLLLIVLVETVAVCYLYGLRRFESDLKAMTGHALNWYWKAMWGGVSPLLIISLFVFYLSDYIITGTLQYQAWDASQGQLVTKDYPPYALAIIGLLVASSTMCIPLGALGTFIVRHLKRGDTASVA*