Part of scaffold_1046 (Scaffold)

For more information consult the page for scaffold_1046 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TSSC1 ENSTTRG00000005935 (Bottlenosed dolphin)

Gene Details

tumor suppressing subtransferable candidate 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000005608, Bottlenosed dolphin)

Protein Percentage 60.2%
cDNA percentage 63.38%
Ka/Ks Ratio 0.21635 (Ka = 0.1859, Ks = 0.8592)

BT.38451 ENSBTAG00000018387 (Cow)

Gene Details

protein TSSC1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000055251, Cow)

Protein Percentage 76.53%
cDNA percentage 79.25%
Ka/Ks Ratio 0.09761 (Ka = 0.1476, Ks = 1.5125)

TSSC1  (Minke Whale)

Gene Details

tumor suppressing subtransferable candidate 1

External Links

Gene match (Identifier: BACU016816, Minke Whale)

Protein Percentage 78.05%
cDNA percentage 82.11%
Ka/Ks Ratio 0.18502 (Ka = 0.1414, Ks = 0.7644)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 885 bp    Location:229075..221574   Strand:-
>bmy_14879
ATGCAGGGGAAAAGGGGTGGGGCCCCTGCCCGTCATCAGAGGAGCAGCCCCTCCGCCGCCCCCAGCCCCTCGGCCCGTGTTGACCCCTCCCGGCGGGCTCCCCACCCGGCTGAGCCGGTCCACGTCCTCCGGGAGGTTGGGGGTGAGTCTGAGGGTCAGTGGGGTCCCCCGTGGGGCCCGCTCAGTTCAAATTATTTGTGTTTTCTTCTTCCTTTGAAAACATCACCCAATTTGCAGCTGGCCAGTTCGGCGTCCCTGGAAGGGAAGGGACAGCTGAAGTTCACAACGGGGCGGTGGAGCCCGCATCACAACTGCACCCAGGTGGCCACGGCGAACGACACGGCTGTCCGAGGGTGGGACACACGGACCATGAGCCAAATCTACTGCATTGAGAGCGCACATGGCCAGCTGGTGCGGGACCTGGATTTCAACCCCAACAAGCAGTACTACCTGGCCAGCTGCGGGGACGACTGCAGGGTGAAGTTCTGGGACACCCGCAACGTCACCGAGCCCGTCAAGACGCTGGAGGAGCACTCCCACTGGGTGTGGAGCRTCCGCTACAACCACTCACACGACCAGCTGGTCCTCACGGGCAGCAGTGACAGCAGGGTCATCCTTTCCAACATGGTGTCCATCTCCTCCGAGCCCTTCGGCCACCTGGTGGACGACGACGACCTGAGTGACCAGGAGGAGCGCCGTCCGGAGGAGAAGAGCCAGGAGCCTCCCCAGGACAGCGTCATCGCCACCTACGAGGAGCACGAGGACAGCGTGTACGCCGCGGACTGGTCCTCGGCCGACCCCTGGCTCTTTGCCTCCCTGAGCTATGACGGGAGGCTGGTCATCAACAGGGTGCCCCGGGCGCTCAAGTACCACATTCTGCTCTGA

Related Sequences

bmy_14879T0 Protein

Length: 295 aa      View alignments
>bmy_14879T0
MQGKRGGAPARHQRSSPSAAPSPSARVDPSRRAPHPAEPVHVLREVGGESEGQWGPPWGPLSSNYLCFLLPLKTSPNLQLASSASLEGKGQLKFTTGRWSPHHNCTQVATANDTAVRGWDTRTMSQIYCIESAHGQLVRDLDFNPNKQYYLASCGDDCRVKFWDTRNVTEPVKTLEEHSHWVWSXRYNHSHDQLVLTGSSDSRVILSNMVSISSEPFGHLVDDDDLSDQEERRPEEKSQEPPQDSVIATYEEHEDSVYAADWSSADPWLFASLSYDGRLVINRVPRALKYHILL*