Part of scaffold_1046 (Scaffold)

For more information consult the page for scaffold_1046 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

ENSTTRG00000001615 (Bottlenosed dolphin)

Gene Details

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000001521, Bottlenosed dolphin)

Protein Percentage 89.68%
cDNA percentage 92.46%
Ka/Ks Ratio 0.62159 (Ka = 0.0323, Ks = 0.052)

RNASEH1 ENSBTAG00000016235 (Cow)

Gene Details

ribonuclease H1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000021600, Cow)

Protein Percentage 84.55%
cDNA percentage 85.37%
Ka/Ks Ratio 0.171 (Ka = 0.0802, Ks = 0.4692)

RNASEH1  (Minke Whale)

Gene Details

ribonuclease H1

External Links

Gene match (Identifier: BACU016814, Minke Whale)

Protein Percentage 61.6%
cDNA percentage 68.07%
Ka/Ks Ratio 0.33489 (Ka = 0.3313, Ks = 0.9893)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 762 bp    Location:422557..412001   Strand:-
>bmy_14883
ATGACCAGGCTCCTGGGCGTGGCGCACAGAGTGGCTTTGGCTGCCGTGCGTTGCAGTGGCCGCAGCTGCCGCGGGCTCGCCATGTTCTATGCCGTGAGGAGGGGCCGCAAGGCCGGGGTCTTCCAGACCTGGGATGAATGCAGAGCCCAGAAAAATAAACGTGTACAGGAATCACAAGTGAAGGCAGACAAGCGACTTCATGAGCCCTTGGATGAAGGTGAAGGTGAAACCACAGAGCCATGTGCAAAGCACGTGAAACAGAATGCAGAACCGCTGCCTTCAGTGAGCAAAGACACGTTTTCTTATATGGGGCACTCTGTCATCGTCTACACGGACGGCTGCTGCTCCAGTAATGGGCGGAGGAGGGCTCGAGCAGGAATCGGTGTTTACTGGGGGCCAGGCCATCCTTTAAATGTAGGAATTAGACTTCCTGGGCGACAGACAAACCAAAGAGCAGAGATTCATGCAGCCTGCAAAGCCATCGAACAGGCGAAGGCTCAGAACATCAATAAGTTGGTCCTCTACACAGACAGCATGTTTACTATCAATGGCATCACTAATTGGCTGCAAGGCTGGAAGAAGAGTGGATGGAGGACAAGCACAGGGAAGGAGGTGATCAACAAAGAGGACTTCATGGAGCTGGACAGGCTTGTCCAGGGCATGGACATTCAGTGGATGCATGTTCCTGGCCATTCGGGATTTATAGGCAACGAAGAAGCTGACAGATTAGCAAGACAAGGCGCGAAGCAACCTGAAGACTGA

Related Sequences

bmy_14883T0 Protein

Length: 254 aa      View alignments
>bmy_14883T0
MTRLLGVAHRVALAAVRCSGRSCRGLAMFYAVRRGRKAGVFQTWDECRAQKNKRVQESQVKADKRLHEPLDEGEGETTEPCAKHVKQNAEPLPSVSKDTFSYMGHSVIVYTDGCCSSNGRRRARAGIGVYWGPGHPLNVGIRLPGRQTNQRAEIHAACKAIEQAKAQNINKLVLYTDSMFTINGITNWLQGWKKSGWRTSTGKEVINKEDFMELDRLVQGMDIQWMHVPGHSGFIGNEEADRLARQGAKQPED*