Part of scaffold_1046 (Scaffold)

For more information consult the page for scaffold_1046 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

COLEC11 ENSTTRG00000001618 (Bottlenosed dolphin)

Gene Details

collectin sub-family member 11

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000001524, Bottlenosed dolphin)

Protein Percentage 94.01%
cDNA percentage 93.13%
Ka/Ks Ratio 0.13699 (Ka = 0.0347, Ks = 0.2536)

COLEC11 ENSBTAG00000016225 (Cow)

Gene Details

Collectin-11

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000021590, Cow)

Protein Percentage 89.89%
cDNA percentage 89.39%
Ka/Ks Ratio 0.11123 (Ka = 0.0533, Ks = 0.4796)

COLEC11  (Minke Whale)

Gene Details

collectin sub-family member 11

External Links

Gene match (Identifier: BACU016812, Minke Whale)

Protein Percentage 95.02%
cDNA percentage 95.26%
Ka/Ks Ratio 0.20902 (Ka = 0.0296, Ks = 0.1415)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1185 bp    Location:474060..502898   Strand:+
>bmy_14886
ATGTTGTTCCCGTTCTGGAGTCAGCGTGCTGCGAGGCTCATCATGAAGCGGGCTCTGGCTCTGATCGGCCTGGCCTTCCTGTCGGTGCTCCGGGCTGGGGGCGCTCAGCAGACGGTGGACGACACCTGCTCCGTGCAGATTCTCGTCCCCGGCCTCAAAGGTGTCCCCGTGCGGGAGGACCCTGCCCCTGAGCAGCAGTGTACCCTCTGGGGGGTGCTCACACTGAAGGGACAAGGGGACGCCGACTCGTGTGCCCAAGTTTATTCTTCCCGAGCGTACTGGCCAGACAAGGGAAGAGAGAGGCCAGCACGGGCGGGGATGCTGGAGAGAAGGGGGACAAAGGTGCACCAGGACGGCCTGGAAGAGTCGGCCCTACGGGAGAGAAAGGTCTCCTCTGGTCCGAGGGCCCAGGCCGTGGGCCCCAAGGGTGCAGGGCTGAGCAGGGACAGGGCAGGCCTGGCCCCTGAGCGGCTCCTCACAGACCAGCGGCTTGCCTTCCTCAGTGCGGCGCTCCAGGGTCCCCGGCCTGCTCTTCCCACGGGGGGCCTTCTTGCTGGGCCCCCTGGTGCAGGAGACGTGGGTGACAAAGGACAGAAAGGCGGTGTGGGGCGCCATGGAAAGATTGGTCCCATCGGTTCTAAAGGTGAAAAAGGAGATTCTGGTGACATAGGACCCCCTGGCCCTAATGGAGAACCAGGCATCCCGTGTGAGTGCGGCCAGCTGAGGAAGGCCGTCGGGGAGACGGACAACCAGGTCGCCCAGATCACAGCGGAGCTGAAGTTCATCAAACACGCCGTCGCCGGCGTGCGCGAGACGGAGCAGAAGATCTACCTGCTGGTGAAGGAGGAGAAGCGGTACGTGGACGCACAGCTGGCCTGCCAGGGCCGCGGCGGCACGCTGGGCATGCCCAAGGACGAGGCCGCCAACGGGCTGCTGGCCGCCTACGTGGCGCAGGCCGGCCTGGCCCGCGTCTTCATCGGCATCAACGACCTGGAGCGGGAGGGCGCCTTCGTCTACGCGGACCGCTCGCCCATGCAGACCTTCAGCAAGTGGCGCAGCGGAGAGCCCAACAACGCCTACGACGAGGAGGACTGCGTGGAACTGGTGGCCTCCGGGGGCTGGAACGACGTGGCCTGCCACCTCACCATGCCCTTCCTCTGTGAGTTCGACAAGGAGAACGTGTAG

Related Sequences

bmy_14886T0 Protein

Length: 395 aa      View alignments
>bmy_14886T0
MLFPFWSQRAARLIMKRALALIGLAFLSVLRAGGAQQTVDDTCSVQILVPGLKGVPVREDPAPEQQCTLWGVLTLKGQGDADSCAQVYSSRAYWPDKGRERPARAGMLERRGTKVHQDGLEESALRERKVSSGPRAQAVGPKGAGLSRDRAGLAPERLLTDQRLAFLSAALQGPRPALPTGGLLAGPPGAGDVGDKGQKGGVGRHGKIGPIGSKGEKGDSGDIGPPGPNGEPGIPCECGQLRKAVGETDNQVAQITAELKFIKHAVAGVRETEQKIYLLVKEEKRYVDAQLACQGRGGTLGMPKDEAANGLLAAYVAQAGLARVFIGINDLEREGAFVYADRSPMQTFSKWRSGEPNNAYDEEDCVELVASGGWNDVACHLTMPFLCEFDKENV*