Sequence detailsbmy_14906 (Coding sequence)

Part of scaffold_1048 (SequenceType object (1))

For more information consult the page for scaffold_1048 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CLDN20ENSTTRG00000006331 (Bottlenosed dolphin)

Gene Details

claudin 20

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000005987, Bottlenosed dolphin)

Protein Percentage 90.28%
cDNA percentage 94.75%
Ka/Ks Ratio 0.62986 (Ka = 0.0487, Ks = 0.0774)

Additional orthologs identified in other species via the OPTIC pipeline.

CLDN20 (Cow)   CLDN20 (Human)   Cldn20 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 660 bp    Location:22430..21771   Strand:-
Raw sequence 
>bmy_14906
ATGACCTCAGCGGGTCTCCAGCTCCTTGCTTTTGCCCTGGCCTTATCTGGGGTCTCTGGAGTGCTCATGGCCACCCTGCTGCCCAACTGGAAGGTGAACGTGGATGCGGGCTCCAGCATCATCACAGCCATCGTGCAGCTGCAAGGGCTGTGGATGGACTGCACGTGGTATAGCACCGGGATGTTCAGCTGCACCTTGAAGTACTCCGTCCTGGCCCTCCCCACCCACGTGCAGGCCGCCCGGGCCGCCATGGTCCTGGCCTGTGTCCTGTCTGCTGTGGGGATCTGCACTTCCACAATCGGGATGAAATGCACTCGCTTAGGAGGGGACAGGGAAACCAAGGGTTACGCCTGTTTTGCTGGGGGAGTCTGTTTCCTGTCTGCGGGGGTCTCTGGTTTAATACCGACGGTGTGGTACACGAAGGAGATCATAGCAAACTTTGTGGATGTGACGGTTCCAGAAAGCAACAAACATGAACCCGGAGGAGCTGTCTACATTGGATTCATTTCGGCCATGCTGCTGTTTATCTCTGGCATGATTTTCTGCACATCCTGTATAAAAGAGAATTCGGAAGCTTGGCTCCACCCATCCAAGCAGCAGCACGTCTCCATCACACAGCCAGAGGACCATTCAGCATACAGCCTGAAGGATTATGTGTGA

Related Sequences

bmy_14906T0 SequenceType object (3)

Length: 220 aa      
>bmy_14906T0
MTSAGLQLLAFALALSGVSGVLMATLLPNWKVNVDAGSSIITAIVQLQGLWMDCTWYSTGMFSCTLKYSVLALPTHVQAARAAMVLACVLSAVGICTSTIGMKCTRLGGDRETKGYACFAGGVCFLSAGVSGLIPTVWYTKEIIANFVDVTVPESNKHEPGGAVYIGFISAMLLFISGMIFCTSCIKENSEAWLHPSKQQHVSITQPEDHSAYSLKDYV*