Part of scaffold_1048 (Scaffold)

For more information consult the page for scaffold_1048 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SCAF8 ENSTTRG00000014538 (Bottlenosed dolphin)

Gene Details

SR-related CTD-associated factor 8

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000013785, Bottlenosed dolphin)

Protein Percentage 99.11%
cDNA percentage 98.76%
Ka/Ks Ratio 0.0957 (Ka = 0.0036, Ks = 0.038)

SCAF8 ENSBTAG00000031917 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000042661, Cow)

Protein Percentage 96.44%
cDNA percentage 94.75%
Ka/Ks Ratio 0.08813 (Ka = 0.016, Ks = 0.1815)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 3891 bp    Location:442126..394880   Strand:-
>bmy_14910
ATGACCCAAATTACTAAAGCAGCCATCAAAGCTATTAAGTTCTATAAACATGTGGTACAGAGTGTTGAGAAATTCATTCAGAAATGTAAACCAGAATACAAGGTACCTGGACTTTATGTTATTGACTCTATTGTACGACAATCTCGACATCAGTTTGGTCAAGAAAAGGATGTGTTCGCACCCAGATTTAGTAATAACATCATTAGCACTTTCCAGAATTTATATCGTTGCCCTGGAGACGACAAGAGTAAAATAGTGAGAGTATTAAACTTATGGCAGAAGAATAATGTATTTAAAAGTGAGATTATTCAGCCTCTTTTGGATATGGCAGCGGGGATTCCTCCTCCAGTTGTCACACCTGTTTTGGCCAGTACTACTGCTGCTATGAGCAATACCCCAGGAACTCCTGTGACACCTGTTACTCCAGCCAATGTGGTCCAAGGTTTACCTGATCCGTGGGTGTCTCAGATAACAAATACAGATACACTTGCAGCTGTAGCTCAGATCTTACAAAGTCCTCAAGGCCAACAGCTTCAGCAGTTAATACAGACTTTACAGATACAGCAGCAGAAGCCTCAGCCTTCCATCTTGCAAGCCCTGGACGCCGGCCTTGTGGTCCAGCTGCAGGCTCTTACAGCACAGCTCACAGCAGCGGCTGCAGCAGCCAGCACCCTTAATCCCCTAGAACAGGGAGTGTCTTTTAACAAGAAGTTGATGGATAGGTTTGATTTTGGGGAAGATTCTGAGCATAGTGAAGAACCCAAAAAGGAAATTCCAGCTTCTCAACTTTCTCATGTTTCAGAATCTGTGAACAATTCCATCTTTCATCAGATAGCAGAACAGCTRCAGCAGCAAAATCTTGAACATCTCAGACAGCAACTCCTGGAACAGCAACAGCCTCAAAAGGCAACTCCTCAGGATAGTCAAGAAGGAACATTTGGGTCAGAGCATTCCGTGTCACCATCACAAGGGAGCAGTCAACAGCATTTCCTTGAACCTGAAGCAAATTTGGATGATTCCATAGATATTCAGCAGCAGGATATGGATATAGATGAAGGGCAAGATGGAGTGGAAGAGGAGATCTTTGAACAGGAAGCAAAGAAAGTGGCTGTTCGCTCAAGATCAAGAACGCATTCACGATCTCGTTCAAGCAACACCTCCTTACTAAGTATTTTGAAGAGAGTTCAATGGCATATGACTGACAGGAAAAAAGAAACAAACGTAACATCTTTGTCACCTAAAGAATCTTTTTGTTTTCTTCCATCTTTCATCCCTGTTCTTGACTCTTGTTTGAAAAATGAGTTGGAAGACACTAAGAGAAAATCACCAAGAAAACGAAGGTCTAGGTCACGATCTGGTTCTCGAAAGCGTAAACACAGAAAGCGATCACGCTCTCGCTCTAGAGAAAGAAAAAGGAAATCATCACGTTCATACTCAAGTGAAAGAAGAGCTAGAGAAAGGGAGAAAGAACGACAGAAGAAAGGATTGCCTCCAATTAGATCTAAAACATTAAGTGTATGTAGTACTACTCTGTGGGTTGGTCAGGTAGACAAGAAGGCAACCCAGCAAGATTTAACCAACCTGTTTGAAGAGTTTGGACAGATTGAATCCATTAATATGATTCCTCCCAGGGGCTGTGCTTATGTCTGCATGGTTCATCGACAAGATGCATTTCGGGCTCTTCAGAAACTTAGTTCCGGGTCATATAAAATTGGGTCCAAGGTCATTAAGATTGCTTGGGCTTTAAACAAAGGTGTGAAAACAGAATACAARCAATTCTGGGATGTGGATCTTGGAGTAACATATATACCATGGGAAAAAGTTAAAGTGGATGACTTGGAAGGTTTTGCAGAAGGAGGCATGATTGATCAGGAAACTGTAAATACTGAGTGGGAAAGTGTGAAAAGCTCAGAACCCGTTAAAGAGACGGTCCAGACAACTCAGAGCCCACCTCCAGTTGAAAAGGAGACAGTGGTCACAACCCAGGCAGAGGTTTTCCCTCCACCTGTTGCTATGTTACAGATTCCAGTAGCTCCAGCAGTGCCTACAGTTAGTTTAGTCCCACCAGCCTTTCCTGTGTCAATGCCAGTTCCTCCTCCTGGATTCAGTCCAATTCCTCCACCGCCTTTTCTCCGCGCGAGTTTTAACCCTTCACAACCACCTCCTGGTTTCATGCCACCTCCAGTTCCACCACCTGTTGTACCACCACCTACTATTCCACCAGTAGTACCAACATCTTTAGTGCAGCCGCCATTATCTATGACTCCAGAAACTGTGAAAGATGTTGGATTTGGTGGTTCTGTTGCCAGCAGTCTTGCTACTTCCACTCTGCCAGCTGGAAGTGTTTTTAATCCTCCAACTAAACAAGCAGAGCCTGAAGAAAAAGTACCTCATCTTATAGACCACCAGATTTCTTCTGGTGAAAACACCAGATCAGTGATTCCAAATGATGTTTCAGGTGGTGCTGCGATTTTAGGAGGACAGCCGCCAAATGTGACGARCAATTCTGGAATTCTGGGAGTCCAAAGACCAAATGTATCAAGTAATAATGAAATTCTTGGAGTCCGGCCATCTAATGTTTCCAATAGTTCTGGGATTATTGGAGCCCAGCCACCAAATATTCTAAATAACTCTGGAATTTTGGGAATACAGCCACCAAGTGTGTCGAGTAGTTCTGGACTTCTGGGCATGCTACCCCCAAATATACCTAACAATTCCGGACTTATAGGAGTACAGCCACCCGGTGTTCCAAATACTTCTGGACTTTTGGGAACACAGCCACCAGCTGGGCCTCAAAATTTACCCCCTTTAAATCTTTCTAATCAAAGGATGCCTGCAATGCCAATGTTAGACATTCGTCCAGGACTAATACCACAGACACCTGGACCAAGATTCCCGTTAATGCAGCCTGGAATTCCACCTCAGCGGGGACTCCCTCCCCCAGCGGTACTTGATGCAGCTCTTCATCCACCACCCCGTGGTCCTTTTGCTCCAGGAGATATTTTTAGTCCACCTGAAAGACCTTTTCTAGTTCCTGGAAGACAAAGTGTAGACAGTGTTGCTAATCCAGAAAAAAGGATACCACTTGGGAATGATAACATTCAACAGGAAGGAGATAGAGATTACCGGTTTCCTCCCATAGAAACCAGGGAAACCATTAGTAGACCTCCCCCGGTGGATGTTAGGGATGTGGTTGGACGGCCTGTAGATCCAAGAGAAGGTCCTGGAAGGCCTCCATTAGATGGTAGAGATCATTTTGGAAGACCTCCTGTAGATATTAGAGAGAATCTGGTGAGGCCAGGCATAGATCATCTTGGTCGAAGAGACCACTTTGGCTTTACTCCAGAGAAGCCCTGGGGGCATAGAGATTTTGACGAGAGAGAGCATCGGGTTCTGCCTGTCTATGGTGGTCCAAAAGGCTTACATGAAGAAAGAGGTAGATTTCGGTCTGGAAACTACCGGTTTGATCCTAGAAGTGGTCCTTGGAACAGAGGATTTGGACAAGAAGTTCACAGAGATTTTGATGACCGCAGAAGACCCTGGGAGAGGCAAAGGGATAGGGATGACAGAGATTTTGATTTCTGCAGAGAAATTAATGGAAATCGTTTTGGACGAGATAGAATTCAAAACACCTGGGTCCCCCCTCCTCATGCTCGGGTTTTTGATTTTTTTGAAGGGGCCACTTCTCAGCGAAAAGGTGATAATGTGCCTCAGGTTAATGGTGAAAACACCGAGAGACATGCTCAGCCACCACCTTTACCAGCGCAGAGTGATCCTGAACTTTATGAAAAACTGACATCTTCAAGTGAAATAAACAAGGAGAAGAGTGACACAGTTGCTGATATAGAGAGTGAACCAGTGGTAGAAAGCACAGAAACTGAGGGGACATAA

Related Sequences

bmy_14910T0 Protein

Length: 1297 aa      View alignments
>bmy_14910T0
MTQITKAAIKAIKFYKHVVQSVEKFIQKCKPEYKVPGLYVIDSIVRQSRHQFGQEKDVFAPRFSNNIISTFQNLYRCPGDDKSKIVRVLNLWQKNNVFKSEIIQPLLDMAAGIPPPVVTPVLASTTAAMSNTPGTPVTPVTPANVVQGLPDPWVSQITNTDTLAAVAQILQSPQGQQLQQLIQTLQIQQQKPQPSILQALDAGLVVQLQALTAQLTAAAAAASTLNPLEQGVSFNKKLMDRFDFGEDSEHSEEPKKEIPASQLSHVSESVNNSIFHQIAEQLQQQNLEHLRQQLLEQQQPQKATPQDSQEGTFGSEHSVSPSQGSSQQHFLEPEANLDDSIDIQQQDMDIDEGQDGVEEEIFEQEAKKVAVRSRSRTHSRSRSSNTSLLSILKRVQWHMTDRKKETNVTSLSPKESFCFLPSFIPVLDSCLKNELEDTKRKSPRKRRSRSRSGSRKRKHRKRSRSRSRERKRKSSRSYSSERRAREREKERQKKGLPPIRSKTLSVCSTTLWVGQVDKKATQQDLTNLFEEFGQIESINMIPPRGCAYVCMVHRQDAFRALQKLSSGSYKIGSKVIKIAWALNKGVKTEYKQFWDVDLGVTYIPWEKVKVDDLEGFAEGGMIDQETVNTEWESVKSSEPVKETVQTTQSPPPVEKETVVTTQAEVFPPPVAMLQIPVAPAVPTVSLVPPAFPVSMPVPPPGFSPIPPPPFLRASFNPSQPPPGFMPPPVPPPVVPPPTIPPVVPTSLVQPPLSMTPETVKDVGFGGSVASSLATSTLPAGSVFNPPTKQAEPEEKVPHLIDHQISSGENTRSVIPNDVSGGAAILGGQPPNVTXNSGILGVQRPNVSSNNEILGVRPSNVSNSSGIIGAQPPNILNNSGILGIQPPSVSSSSGLLGMLPPNIPNNSGLIGVQPPGVPNTSGLLGTQPPAGPQNLPPLNLSNQRMPAMPMLDIRPGLIPQTPGPRFPLMQPGIPPQRGLPPPAVLDAALHPPPRGPFAPGDIFSPPERPFLVPGRQSVDSVANPEKRIPLGNDNIQQEGDRDYRFPPIETRETISRPPPVDVRDVVGRPVDPREGPGRPPLDGRDHFGRPPVDIRENLVRPGIDHLGRRDHFGFTPEKPWGHRDFDEREHRVLPVYGGPKGLHEERGRFRSGNYRFDPRSGPWNRGFGQEVHRDFDDRRRPWERQRDRDDRDFDFCREINGNRFGRDRIQNTWVPPPHARVFDFFEGATSQRKGDNVPQVNGENTERHAQPPPLPAQSDPELYEKLTSSSEINKEKSDTVADIESEPVVESTETEGT*