Part of scaffold_1054 (Scaffold)

For more information consult the page for scaffold_1054 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

NIPA2 ENSTTRG00000015796 (Bottlenosed dolphin)

Gene Details

non imprinted in Prader-Willi/Angelman syndrome 2

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000014967, Bottlenosed dolphin)

Protein Percentage 98.89%
cDNA percentage 98.7%
Ka/Ks Ratio 0.1827 (Ka = 0.0054, Ks = 0.0296)

NIPA2 ENSBTAG00000016895 (Cow)

Gene Details

Magnesium transporter NIPA2

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000022471, Cow)

Protein Percentage 96.94%
cDNA percentage 95.56%
Ka/Ks Ratio 0.12228 (Ka = 0.0152, Ks = 0.1246)

NIPA2  (Minke Whale)

Gene Details

non imprinted in Prader-Willi/Angelman syndrome 2

External Links

Gene match (Identifier: BACU017760, Minke Whale)

Protein Percentage 100.0%
cDNA percentage 99.44%
Ka/Ks Ratio 0.001 (Ka = 0.0, Ks = 0.0201)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1083 bp    Location:340954..359198   Strand:+
>bmy_14942
ATGAGCCAGGGCCGTGGAAAATATGACTTTTATATTGGTCTGGGATTGGCTATGAGCTCCAGCATTTTCATTGGAGGGAGTTTCATTTTGAAAAAAAAAGGCCTTCTGCGACTTGCCAGAAAAGGCTCCATGAGAGCAGGTCAAGGTGGCCATGCATATCTTAAAGAATGGTTGTGGTGGGCTGGACTGCTATCAATGGGAGCTGGCGAGGTGGCCAACTTTGCTGCGTATGCCTTTGCACCAGCCACCCTAGTGACTCCGTTAGGGGCACTCAGTGTCCTAGTGAGTGCCATTCTTTCTTCATACTTTCTAAATGAAAGACTTAACCTTCATGGAAAAATTGGATGTTTGCTAAGTATTCTGGGATCTACAGTTATGGTTATTCATGCTCCGAAAGAAGAGGAGATTGAGACTTTAAATGAAATGTCTCACAAGCTAGGAGATCCAGGTTTTGTGGTCTTTGCAACACTTGTGGTCATTGTGTCCTTGATATTAATCTTTGTGGTTGGACCTCGCCATGGACAGACAAACATTCTTGTGTATATCACAATCTGCTCTGTTATTGGAGCGTTTTCAGTCTCCTGTGTTAAGGGCCTGGGCATTGCTATCAAAGAGCTGTTTGCTGGAAAGCCTGTGCTGCGACATCCSCTGGCCTGGATTCTGCTGCTGAGCCTTATAGTCTGTGTGAGCACACAGATTAATTACCTGAACAGGGCCCTGGACATATTCAACACTTCCATCGTGACTCCAATATATTACGTATTCTTTACAACATCAGTTTTAACTTGCTCAGCTATTCTTTTTAAGGAGTGGCAAGATATGCCTGTTGATGATGTCATCGGTACTCTGAGTGGCTTCTTTACAATCATTGTGGGAATATTCTTGTTGCATGCCTTTAAAGACGTCAGCTTTAGTCTCGCAAGTCTGCCTGTGTCTTTTCGGAAAGATGAAAAAGCAGTGAATGGCAGTCTCTGTAATATGTATGAAGTTCTTAATAATAGTGAAGAGAGCTTAACCTGTGGAATTGAACAACACACTGCTGAAAATATCTCCCGAAGAAATGGAAATCTGACAGCTTTTTAA

Related Sequences

bmy_14942T0 Protein

Length: 361 aa      View alignments
>bmy_14942T0
MSQGRGKYDFYIGLGLAMSSSIFIGGSFILKKKGLLRLARKGSMRAGQGGHAYLKEWLWWAGLLSMGAGEVANFAAYAFAPATLVTPLGALSVLVSAILSSYFLNERLNLHGKIGCLLSILGSTVMVIHAPKEEEIETLNEMSHKLGDPGFVVFATLVVIVSLILIFVVGPRHGQTNILVYITICSVIGAFSVSCVKGLGIAIKELFAGKPVLRHPLAWILLLSLIVCVSTQINYLNRALDIFNTSIVTPIYYVFFTTSVLTCSAILFKEWQDMPVDDVIGTLSGFFTIIVGIFLLHAFKDVSFSLASLPVSFRKDEKAVNGSLCNMYEVLNNSEESLTCGIEQHTAENISRRNGNLTAF*