Part of scaffold_1054 (Scaffold)

For more information consult the page for scaffold_1054 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TUBGCP5 ENSTTRG00000006189 (Bottlenosed dolphin)

Gene Details

tubulin, gamma complex associated protein 5

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000005891, Bottlenosed dolphin)

Protein Percentage 93.55%
cDNA percentage 93.59%
Ka/Ks Ratio 0.18908 (Ka = 0.0062, Ks = 0.033)

BT.103306 ENSBTAG00000014714 (Cow)

Gene Details

gamma-tubulin complex component 5

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000019582, Cow)

Protein Percentage 95.37%
cDNA percentage 94.05%
Ka/Ks Ratio 0.13885 (Ka = 0.0234, Ks = 0.1687)

TUBGCP5  (Minke Whale)

Gene Details

tubulin, gamma complex associated protein 5

External Links

Gene match (Identifier: BACU009936, Minke Whale)

Protein Percentage 99.32%
cDNA percentage 99.14%
Ka/Ks Ratio 0.11253 (Ka = 0.003, Ks = 0.0268)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 2946 bp    Location:565749..516348   Strand:-
>bmy_14945
ATGGCGTCTCCCGGGCCGTCTTGGAGCTGGCTGGACCGAAGGCAAGAACGCGACGTGCGCGAGCTCGTCCGCCTTGTGGCGGGCGTCCAGAACGAGGCGGACCCCAACTTCCAGCTCGCCTTGCACTTCGCTTGGTCCAACTTCAGGTGCGGGCGCGGCACCGGAGCCGGGGACGGGAAGGGGTCTGGCGAGGTGTGGGGCGCGTGGCGCGACCGGCAGAGCCCCAGCGCGCCTTGCCGCTCCAGCTGCTTGGTGACCTCGCGCCTTCTGGGTCCCCGACGCGGTGACACACGCAAGCTCAAACAATTTCATCGTTTCTTGGATGTCAACAGCCACAAAGTAGAAAAGACAATAGAAGGGATTTATGAAAAATTCATCATTCATTCTGATCTCAGCAAAGCTGCTAGTTGGAAGAGATTAACTGAGGAATTTCTAAATGCATCACTTCCAAGCATAAAGGAAATCAAGAAAGCTCTTACCAGCCTCAGTGATTCATATTTTTCATTTCTTGTTTTAAAGACAGATGCACATTATTCCATACTGTCACTTCTTCTATGTCTGTCTGATTCTCCTTCAAACAGCAATTATGTGGAAACACCAAGAGATAAAGAAGTGGAAAAGAAAGATGATTTCGACTGGGGAAAATACTTGATGGAAGGTGAAGAAATTGACCTTGGCTCAAATGTAGACACACCAAATTGGTCTGAAGAAAGTGAAGATGAAGATGATCAACAGCCTTTAAGCAGAGAGGACTCTGGGATTCAGGTGGACAGGACACCATTAGAAGAACAAGATCAAAACAAAAAACTGGGACCTCAAGTCAGCTGGAAAGATGAGTCAGATGCCCGAAGCTGGCTGGAACAACATGTGGTCCGTCAGTACTGGACAGTCAGGTCCTCGAGGTTTCCTCATAGTTTACATTTGCACTCCAATCTAGCTGCTGTCTGGGACCAACATTTGTACAGCAGTGACCCATTATATGTTCCAGATGACAGAGTTTTTGTTACTGAAACGCAGGTTATTCGGGAAACCCTATGGTTACTTTCAGGGGTAAAAAAGCTCTTTATATTTCAGCTGATAGATGGAAAGGTAACTGTGAGGAACAACATTATAGTAACTCATTTGACACATAGCTGTTTACGATCAGTGCTAGAACAAATAGCAGCATATGGCCAGGTTGTGTTTCGACTCCAGGAGTTTATTGATGAAATCATGGGGCACAGCTCTGAAAGCCTGTTACCTGGAAATAGTTCCGTTCCTAAGAAGTCGACAGAAGCACCTTTTAGAACATACCAGGCTTTCATGTGGGCCCTGTACAAATACTTCATTAGTTTCAAAGAGGAACTTACAGAAATTGAGAAGTGCATCATCAATAATGATACTACAATAACTCTTGCGATAGTGGTGGACAAGTTGTCACCTCGGTTAGCTCAGCTCAAGGTTCTGCACAAAGTGTTTAGTACTGGAGTAGCGGAAGTTCCACCTGACACTCGAAATGTCGTTCGAGCATCTCACCTGCTCAACACCCTGTACAAAGCCATCCTTGAATATGACAATGTTGGAGAAGCCTCTGAGCAAACTGTCTCCTTGCTGTTCTCGCTCTGGGTGGAGACCGTGCGGCCCTACCTGCAGACTGTAGATGAGTGGATCGTGCATGGGCACCTGTGCGACTGTGCCCGGGAGTTCATCATCCAGAGAAACAAGAATGTTCCGGTAAATCACAGAGACTTTTGGTATGCAACTTACACGCTATACAGTGTATCAGAAAAGACAGAAAACGAAGAAAAAATGAGTGATAACGCTAGTGCGAGTTCTGGCAGTGATCAAGGGCCCTCCAGCAGGCAGCACACCATGGTGTCCTTCCTGAAACCCGTCCTCAAGCAGATCATAATGGCTGGCAAGTCAATGCAGCTGCTGAAGAACCTGCAATGCATGGAGAGCACCACGTGCCAAGCCACAGCCAGAGATGCAGAAAGAAAAAGTCTGTATACCCTGTTTCTGGAGTCTGTGCAGTCTCGTCTTCGACACGGAGAAGACTCCACTGCACAGGCCCTCACTGAGCAGCAGGCCACCAGAGAGACCCTCATTAAGATGCAGTCCATTGCCGAGAGGCATCTTGAACTGGATGATGTTCATGATCCGCTGCTGGCGATTAATTTTGCAAGGTTGTATTTGGAACAGAGTGACTTTCACGAGAAGTTTGCTGGTGGAGACATATGTGTGGATAGATCATCAGAATCTGTGACTTGCCAGACTTTTGAATTAACGCTGAGATCTTGCCTCTATCCTCATATTGACAAGCAGTATCTAGATTGCTGTGGAAACCTCATGCGAACTCTAAAAAAAGATTACAGGTTGGTTGAGTACTTGCAGGCCATGAGGAATTTCTTCTTAATGGAAGGGGGAGATACCATGTATGACTTCTACACGTCAATTTTTGATAAAATAAGAGAAAAGGAAACCTGGCAGAATGTGTCTTTTCTTAATGTCCAGCTTCAAGAAGCAATTCTTCACAGTACAGGGCTGGAGTTTCAACATCAAGTCGAAGAAGCCAAGGATTTAGATCAATTGATTAAAATTCACTATAGATACTTGTCAACCATCCATGATCGATGTCTGCTGAGAGAAAAGGTCAGTTTTGTGAAGGAAGCCATCATGAAGGTGTTGAACTTGGCCCTCATGTTTGCAGACGGTTGGCAGGCTGGCCTGGGGGCGTGGCAAATGGAATCTATAGAGAAAATGGAGTCTGATTTTAAAAACTGCCATATGTTTCTTGTAACAGTTTTAAACAAAGCTGTCTGTAGAGGATCCTTTCCCCATCGTGAGTATTGTGTTAAAATATTACTGCTTTTATATTTTCTGATAACTAAGTCTACCTGTTATTGTTTTGTGGAATCTCTAGCACTGTCACTCATGGCTGGCATGGAGCAGATATCTTCAGTGTAG

Related Sequences

bmy_14945T0 Protein

Length: 982 aa      View alignments
>bmy_14945T0
MASPGPSWSWLDRRQERDVRELVRLVAGVQNEADPNFQLALHFAWSNFRCGRGTGAGDGKGSGEVWGAWRDRQSPSAPCRSSCLVTSRLLGPRRGDTRKLKQFHRFLDVNSHKVEKTIEGIYEKFIIHSDLSKAASWKRLTEEFLNASLPSIKEIKKALTSLSDSYFSFLVLKTDAHYSILSLLLCLSDSPSNSNYVETPRDKEVEKKDDFDWGKYLMEGEEIDLGSNVDTPNWSEESEDEDDQQPLSREDSGIQVDRTPLEEQDQNKKLGPQVSWKDESDARSWLEQHVVRQYWTVRSSRFPHSLHLHSNLAAVWDQHLYSSDPLYVPDDRVFVTETQVIRETLWLLSGVKKLFIFQLIDGKVTVRNNIIVTHLTHSCLRSVLEQIAAYGQVVFRLQEFIDEIMGHSSESLLPGNSSVPKKSTEAPFRTYQAFMWALYKYFISFKEELTEIEKCIINNDTTITLAIVVDKLSPRLAQLKVLHKVFSTGVAEVPPDTRNVVRASHLLNTLYKAILEYDNVGEASEQTVSLLFSLWVETVRPYLQTVDEWIVHGHLCDCAREFIIQRNKNVPVNHRDFWYATYTLYSVSEKTENEEKMSDNASASSGSDQGPSSRQHTMVSFLKPVLKQIIMAGKSMQLLKNLQCMESTTCQATARDAERKSLYTLFLESVQSRLRHGEDSTAQALTEQQATRETLIKMQSIAERHLELDDVHDPLLAINFARLYLEQSDFHEKFAGGDICVDRSSESVTCQTFELTLRSCLYPHIDKQYLDCCGNLMRTLKKDYRLVEYLQAMRNFFLMEGGDTMYDFYTSIFDKIREKETWQNVSFLNVQLQEAILHSTGLEFQHQVEEAKDLDQLIKIHYRYLSTIHDRCLLREKVSFVKEAIMKVLNLALMFADGWQAGLGAWQMESIEKMESDFKNCHMFLVTVLNKAVCRGSFPHREYCVKILLLLYFLITKSTCYCFVESLALSLMAGMEQISSV*