Sequence details bmy_14957 (Coding sequence)

Part of scaffold_1066 (Scaffold)

For more information consult the page for scaffold_1066 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

C1GALT1 ENSTTRG00000013878 (Bottlenosed dolphin)

Gene Details

core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase, 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000013155, Bottlenosed dolphin)

Protein Percentage 98.89%
cDNA percentage 98.71%
Ka/Ks Ratio 0.34897 (Ka = 0.0099, Ks = 0.0283)

C1GALT1  (Minke Whale)

Gene Details

core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase, 1

External Links

Gene match (Identifier: BACU020141, Minke Whale)

Protein Percentage 100.0%
cDNA percentage 99.72%
Ka/Ks Ratio 0.001 (Ka = 0.0, Ks = 0.0163)

Additional orthologs identified in other species via the OPTIC pipeline.

C1GALT1 (Cow)   C1GALT1 (Human)   C1galt1 (Mouse)  

Genome Location

Sequence Coding sequence

Length: 1107 bp    Location:104246..119087   Strand:+
Raw sequence 
>bmy_14957
ATGGCCTCTAAATCTTGGCTGAATTTTTTAACCTTCCTTTGTGGATCAGCAATTGGATTTGTTTTATGTTCTCAGCTACTTAGTATTTTGTTGGGAGAACAGAGGGACCTCCAGCCTAATATTCTTCATAATGATCCTCATGCTAGGCATTCAGATGATAATGAACAGAATCATCTAGAAGGACAGATGAACTTTGATGCAGATGCTAGCCAACATAAAGATGAGAACACTGACATCGCCGAAAACCTCTATCAGAAGGTTAAAATTCTTTGCTGGGTAATGACAGGGCCTCAAAATCTAGAGAAAAAGGCTAAACACGTCAAAGCTACATGGGCCCAGCGTTGTAATAAAGTGTTATTTATGAGTTCAGAAGAAAATAAAGACTTCCCTGCTGTGGGATTAAAAACCAGAGAAGGCAGAGACCAACTATACTGGAAAACAATTAAAGCTTTTCAGTATGTTCATGATCATTATTTAGAAGATGCTGATTGGTTTATGAAAGCAGATGATGATACATATGTTATATTAGATAACTTGAGATGGCTTCTCTCAAAATACAACCCTGAAGAACCCATTTACTTTGGGAGAAGATTTAAGCCCTATGTAAAGCAGGGCTACATGAGTGGAGGAGCAGGATATGTACTGAGCAAAGAAGCCTTGAAGAGATTTGTTGATGCATTTAAAACAGACAAATGTACGCATAGTTCCTCCATCGAAGATTTAGCACTGGGGAGATGCATGGAAATTATAAATGTAGAAGCAGGAGATTCCAGAGATACCACTGGAAAAGAAACTTTTCATCCCTTTGTACCAGAACACCATTTAATTAAGGGTTATCTGCCTAGAACCTTTTGGTACTGGAATTATAACTATTATCCTCCTGTAGAGGGTCCTGGTTGCTGTTCTGATCTTGCAGTTTCTTTTCACTATGTTGATCCTACAACTATGTATGAGTTAGAATACCTCGTTTATCATCTTCGTCCATATGGTTATTTATACAGATATCAACCTGCCTTCCCTGAGAAGATGCTAAAGGAAATAAGTCAAACATACAAAAATGAAGATACAAAAGTAAATCAGGAGCCCTTGAAAGAAAAACATAAATGA

Related Sequences

bmy_14957T0 Protein

Length: 369 aa      
>bmy_14957T0
MASKSWLNFLTFLCGSAIGFVLCSQLLSILLGEQRDLQPNILHNDPHARHSDDNEQNHLEGQMNFDADASQHKDENTDIAENLYQKVKILCWVMTGPQNLEKKAKHVKATWAQRCNKVLFMSSEENKDFPAVGLKTREGRDQLYWKTIKAFQYVHDHYLEDADWFMKADDDTYVILDNLRWLLSKYNPEEPIYFGRRFKPYVKQGYMSGGAGYVLSKEALKRFVDAFKTDKCTHSSSIEDLALGRCMEIINVEAGDSRDTTGKETFHPFVPEHHLIKGYLPRTFWYWNYNYYPPVEGPGCCSDLAVSFHYVDPTTMYELEYLVYHLRPYGYLYRYQPAFPEKMLKEISQTYKNEDTKVNQEPLKEKHK*