Part of scaffold_1049 (Scaffold)

For more information consult the page for scaffold_1049 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

RFC3 ENSTTRG00000011271 (Bottlenosed dolphin)

Gene Details

replication factor C (activator 1) 3, 38kDa

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000010686, Bottlenosed dolphin)

Protein Percentage 98.71%
cDNA percentage 98.71%
Ka/Ks Ratio 0.10013 (Ka = 0.0042, Ks = 0.0418)

RFC3 ENSBTAG00000010787 (Cow)

Gene Details

Replication factor C subunit 3

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000014278, Cow)

Protein Percentage 98.39%
cDNA percentage 96.68%
Ka/Ks Ratio 0.05427 (Ka = 0.006, Ks = 0.1113)

RFC3  (Minke Whale)

Gene Details

replication factor C (activator 1) 3, 38kDa

External Links

Gene match (Identifier: BACU015754, Minke Whale)

Protein Percentage 99.04%
cDNA percentage 99.57%
Ka/Ks Ratio 0.53861 (Ka = 0.0028, Ks = 0.0051)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1107 bp    Location:641781..657025   Strand:+
>bmy_14966
ATGGAGGTAAGGAAAGGCTTCCGTAGTCTTCCGCCCCTAACTCGTTTACGCCGCCGCGCCGGTAGTGATGTCGCGAGATTTGGAGCTCGCGGGAAAACTTGTTTGCGCGTCCGGAGCGGAGGGCGAGCGCGCGGGAAGTTCGAGTGTCGGACCCCGGGAACTCGGGCTGGCATGAGCCTCTGGGTGGACAAATACCGGCCCTGCTCCTTGGGCCAGCTGGACTATCACAAGGAGCAGGCGGCCCAGCTGCGCAACCTGGTGCAGTGTGGTGACTTTCCTCATCTGTTAGTCTATGGACCATCAGGTGCTGGAAAAAAGACAAGAATTATTGATGCTGGAAATAGTGACCGGGTAGTAATTCAGGAGATGTTGAAAACAGTGGCACAATCACAGCAACTTGAAACAAACTCTCAAAAAGATTTTAAAGTCGTGTTATTGACAGAAGTTGACAAACTCACTAAAGATGCTCAGCATGCCTTGCGCAGAACCATGGAAAAGTATATGTCCACCTGCAGGTTGATCTTGTGTTGCAATTCTACATCAAAAGTGATACCACCTATTCGTAGTAGGTGCCTTGCAGTTCGTGTGCCTGCTCCCAGCATTGAAGAKATTTGCCATGTGTTATCTACTGTGTGCAAGAAGGAAGGTCTAAATCTTCCTTCACAACTGGCTCGTAGACTTGCAGAGAAGTCCTGCAGAAATCTCAGAAAAGCCCTGCTTATGTGTGAAGCCTGCAGAGTGCAACAATATCCTTTCACTGCAGATCAAGAAATCCCTGAAACAGATTGGGAGGTGTATCTGAGGGAGACTGCCAATGCTATTGTCAGTCAGCAGACTCCACAGAGGCTCCTTGAAGTTCGTGGGAGACTCTATGAGCTTCTAACTCATTGTATTCCTCCTGAAATAATAATGAAGGGCCTTCTATCAGAACTTTTACATAATTGTGATGGACAACTGAAAGGGGAAGTGGCCCAGATGGCAGCTTACTATGAACATCGTCTACAGCTGGGTAGCAAAGCCATTTATCACTTGGAAGCATTTGTGGCCAAATTTATGGCACTTTATAAGAAGTTCATGGAGGATGGATTGGAAGGCATGATATTCTGA

Related Sequences

bmy_14966T0 Protein

Length: 369 aa      View alignments
>bmy_14966T0
MEVRKGFRSLPPLTRLRRRAGSDVARFGARGKTCLRVRSGGRARGKFECRTPGTRAGMSLWVDKYRPCSLGQLDYHKEQAAQLRNLVQCGDFPHLLVYGPSGAGKKTRIIDAGNSDRVVIQEMLKTVAQSQQLETNSQKDFKVVLLTEVDKLTKDAQHALRRTMEKYMSTCRLILCCNSTSKVIPPIRSRCLAVRVPAPSIEXICHVLSTVCKKEGLNLPSQLARRLAEKSCRNLRKALLMCEACRVQQYPFTADQEIPETDWEVYLRETANAIVSQQTPQRLLEVRGRLYELLTHCIPPEIIMKGLLSELLHNCDGQLKGEVAQMAAYYEHRLQLGSKAIYHLEAFVAKFMALYKKFMEDGLEGMIF*