Part of scaffold_1073 (Scaffold)

For more information consult the page for scaffold_1073 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

HCRTR1 ENSTTRG00000013273 (Bottlenosed dolphin)

Gene Details

hypocretin (orexin) receptor 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000012593, Bottlenosed dolphin)

Protein Percentage 97.6%
cDNA percentage 97.2%
Ka/Ks Ratio 0.1324 (Ka = 0.0132, Ks = 0.0996)

HCRTR1 ENSBTAG00000010366 (Cow)

Gene Details

Orexin receptor type 1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000013687, Cow)

Protein Percentage 94.71%
cDNA percentage 93.59%
Ka/Ks Ratio 0.09443 (Ka = 0.026, Ks = 0.2756)

HCRTR1  (Minke Whale)

Gene Details

hypocretin (orexin) receptor 1

External Links

Gene match (Identifier: BACU003291, Minke Whale)

Protein Percentage 97.54%
cDNA percentage 97.62%
Ka/Ks Ratio 0.18585 (Ka = 0.0135, Ks = 0.0727)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1347 bp    Location:189391..197088   Strand:+
>bmy_14973
ATGGAGCCCTCGGCCACCCCAGGGCCCCAGATGGGGGTCCCCACTGGCAGCGGGGAACCGTCCCCGGTGCCTCCAGACTATGAAGACGAGTTTCTCCGCTATCTGTGGCGTGACTATCTGTACCCGAAGCAGTACGAGTGGGTCCTCATCGCCGCCTACGTGGCTGTGTTCCTCGTGGCCCTGGTGGGCAACACACTGGTCTGCCTGGCCGTGTGGCGGAATCACCACATGAGGACGGTCACCAACTACTTCATCGTCAACCTGTCCCTGGCCGACGTGCTGGTGACGGCCATCTGCCTGCCGGCTAGCTTGTTGGTAGACATTACTGAATCCTGGCTCTTCGGCCATGCCCTCTGCAAGGTCATCCCCTATCTACAGGTGAGCTTTGCCTGGGTGCCCCTCATGACCCCCCTGTCATACCAAGTACAAAAACCATGGCCTTGCATAGGTCTCAGTGAACCTCAAACTTGCCTTTTAGACAGGACATCATGGCTCAGTACCTTGGCAGCCTTCATCGCCCTGGACCGCTGGTATGCTATCTGCCACCCCCTGCTGTTCAAGAGCACTGCCCGGCGTGCTCGTGGCTCCATCCTGGGCATCTGGGCCGTGTCGCTGGCTGTCATGGTGCCCCAGGCTGCTGTCATGGAATGCAGCAGTGTGCTGCCCGAGCTAGCCAACCGCACCCGGCTCTTCTCTGTCTGTGATGAACGCTGGGCAGATGATCTCTATCCCAAGATCTACCACAGTTGCTTCTTCATTGTCACCTACCTGGCCCCGCTAGGCCTCATGGCCATGGCCTATTTCCAGATCTTCCGCAAGCTCTGGGGCCGCCAGATCCCCGGCACCACGTCGGCCCTGGTGAGGAACTGGAAGAGGCCCTCAGACCAGCTGGAGGACCAGGGGCAGGGCGTGGGCGCAGAGCCCCCGCCTCGGGCCCGTGCCTTCCTGGCCGAGGTAAAGCAAATGCGAGCTCGGAGGAAGACAGCCAAGATGCTGATGGTGGTGCTGCTGGTCTTTGCCCTCTGCTACCTGCCCATCAGTGTCCTCAATGTCCTCAAGAGCGACCGAGAAGCCGTCTATGCCTGCTTCACCTTCTCCCACTGGCTGGTGTACGCCAACAGCGCCGCCAACCCCATCATCTACAACTTCCTCAGTGGCAAATTCCGGGAGCAGTTTAAGGCCGCCTTCTCCTGCTGCCTGCCTGGCCTGGGTCCCTGCGGCTCTCTGAAGGCCCCCAGCCCTCGCTCCTCTGCCAGCCACAAGTCCTTGTCCTTGCAGAGCCGGTGCTCTGTCTCCAAAGTCTCGGAGCACGTGGTGCTCACCAGTGTCACCACGGTGCTGCCCTGA

Related Sequences

bmy_14973T0 Protein

Length: 449 aa      View alignments
>bmy_14973T0
MEPSATPGPQMGVPTGSGEPSPVPPDYEDEFLRYLWRDYLYPKQYEWVLIAAYVAVFLVALVGNTLVCLAVWRNHHMRTVTNYFIVNLSLADVLVTAICLPASLLVDITESWLFGHALCKVIPYLQVSFAWVPLMTPLSYQVQKPWPCIGLSEPQTCLLDRTSWLSTLAAFIALDRWYAICHPLLFKSTARRARGSILGIWAVSLAVMVPQAAVMECSSVLPELANRTRLFSVCDERWADDLYPKIYHSCFFIVTYLAPLGLMAMAYFQIFRKLWGRQIPGTTSALVRNWKRPSDQLEDQGQGVGAEPPPRARAFLAEVKQMRARRKTAKMLMVVLLVFALCYLPISVLNVLKSDREAVYACFTFSHWLVYANSAANPIIYNFLSGKFREQFKAAFSCCLPGLGPCGSLKAPSPRSSASHKSLSLQSRCSVSKVSEHVVLTSVTTVLP*