Sequence details bmy_14989 (Coding sequence)

Part of scaffold_1068 (Scaffold)

For more information consult the page for scaffold_1068 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

FZD1 ENSBTAG00000002107 (Cow)

Gene Details

frizzled-1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000002720, Cow)

Protein Percentage 98.29%
cDNA percentage 95.18%
Ka/Ks Ratio 0.01588 (Ka = 0.0073, Ks = 0.4578)

FZD1  (Minke Whale)

Gene Details

frizzled class receptor 1

External Links

Gene match (Identifier: BACU016867, Minke Whale)

Protein Percentage 100.0%
cDNA percentage 99.61%
Ka/Ks Ratio 0.001 (Ka = 0.0, Ks = 0.0358)

Additional orthologs identified in other species via the OPTIC pipeline.

FZD1 (Human)   Fzd1 (Mouse)  

Genome Location

Sequence Coding sequence

Length: 1935 bp    Location:299351..301285   Strand:+
Raw sequence 
>bmy_14989
ATGGCTGAGGAGGAGGCGCCTAAGAAGTCCCGGGCCGCCGCCGGCAGCGGCGCAAGCTGGGAACTTTGTGCCGGGGCGCTCCGCACTGGACCGGTGGCGGAGGGGAGCGGGGACGCGGGCAGCTGCCGCCGTACCCTCCCAGTTGACTCCGGACGCTTGGCGCGCGGGCTGCTACTACTGCTTTGGCTGCTGGAGGCTCCGCTGCTACTGGGGGTCCGGGCGCAGGCGGCCGGCCAGGGGCCCGGGCCGGGGCAGCAGCCCCCGCCGCCTCAGCAGCAGCAGAGCGGGCAGCAGTACAATGGCGAGCGGGGCATCTCCATACCGGACCACGGCTACTGCCAGCCCATCTCCATCCCGCTGTGCACGGACATCGCGTACAACCAGACCATCATGCCCAACCTGCTGGGCCACACGAACCAGGAGGATGCGGGCCTCGAGGTGCACCAGTTCTACCCGCTAGTGAAGGTGCAGTGCTCCGCGGAGCTCAAGTTCTTCCTGTGCTCCATGTACGCGCCCGTGTGCACCGTGCTGGAGCAGGCTCTGCCGCCTTGCCGCTCCCTGTGCGAGCGCGCGCGCCAGGGCTGCGAGGCGCTCATGAACAAGTTCGGCTTCCAGTGGCCTGACACGCTCAAGTGCGAGAAGTTCCCGGTGCACGGCGCTGGCGAGCTGTGCGTGGGCCAGAACACGTCGGACAAAGGCACCCCGACGCCCTCGCTGCTGCCTGAGTTCTGGACCAGCAACCCACAGCACGGCGGCGGAGGCTTCCGGGGGGGCGGCTTCGCGGGGGGCGCCGGCGCGTCGGAACGAGGCAAGTTCTCGTGCCCGCGCGCCCTCAAGGTGCCCTCCTACCTCAACTACCACTTCCTGGGGGAGAAGGACTGCGGCGCGCCCTGCGAGCCGACCAAGGTGTACGGGCTTATGTATTTTGGGCCGGAGGAGCTGCGCTTCTCGCGCACCTGGATCGGCATCTGGTCAGTGCTGTGCTGCGCCTCCACGCTCTTCACGGTGCTCACGTACCTGGTGGACATGCGGCGGTTCAGCTACCCGGAGCGGCCCATCATCTTCCTGTCGGGCTGCTACACGGCAGTGGCCGTGGCCTACATCGCCGGCTTCCTGCTGGAGGACCGGGTGGTGTGTAACGACAAATTCGCGGAGGACGGGGCGCGCACGGTGGCGCAGGGCACCAAGAAGGAGGGCTGCACCATCCTCTTCATGATGCTCTACTTCTTCAGCATGGCCAGCTCCATCTGGTGGGTGATCCTGTCGCTCACCTGGTTCCTGGCGGCCGGCATGAAGTGGGGCCACGAGGCCATCGAGGCCAACTCGCAGTACTTCCACCTGGCCGCCTGGGCCGTGCCGGCCATCAAGACCATCACCATCCTGGCGCTGGGCCAGGTGGACGGCGATGTGCTGAGCGGGGTGTGCTTCGTGGGGCTCAACAACGTGGACGCACTGCGCGGCTTCGTGCTGGCGCCACTCTTCGTGTACCTGTTCATCGGCACGTCCTTCCTACTGGCCGGCTTCGTGTCCCTCTTCCGCATTCGCACTATCATGAAGCACGACGGCACCAAGACCGAGAAGCTGGAGAAGCTCATGGTGCGCATCGGCGTCTTCAGCGTGCTCTACACGGTGCCAGCCACTATCGTCATTGCCTGCTACTTCTACGAGCAGGCCTTCCGGGACCAGTGGGAGCGCAGCTGGGTGGCCCAGAGCTGCAAGAGCTATGCTATCCCCTGCCCCCACCTCCAGGCGGGCGGCGCCCCGCCGCACCCGCCCATGAGCCCTGACTTCACAGTCTTCATGATCAAGTATCTTATGACGCTGATCGTGGGCATCACGTCAGGCTTCTGGATCTGGTCCGGCAAGACCCTCAACTCCTGGAGGAAGTTCTACACTAGGCTCACCAATAGCAAACAGGGGGAGACCACCGTCTGA

Related Sequences

bmy_14989T0 Protein

Length: 645 aa      View alignments
>bmy_14989T0
MAEEEAPKKSRAAAGSGASWELCAGALRTGPVAEGSGDAGSCRRTLPVDSGRLARGLLLLLWLLEAPLLLGVRAQAAGQGPGPGQQPPPPQQQQSGQQYNGERGISIPDHGYCQPISIPLCTDIAYNQTIMPNLLGHTNQEDAGLEVHQFYPLVKVQCSAELKFFLCSMYAPVCTVLEQALPPCRSLCERARQGCEALMNKFGFQWPDTLKCEKFPVHGAGELCVGQNTSDKGTPTPSLLPEFWTSNPQHGGGGFRGGGFAGGAGASERGKFSCPRALKVPSYLNYHFLGEKDCGAPCEPTKVYGLMYFGPEELRFSRTWIGIWSVLCCASTLFTVLTYLVDMRRFSYPERPIIFLSGCYTAVAVAYIAGFLLEDRVVCNDKFAEDGARTVAQGTKKEGCTILFMMLYFFSMASSIWWVILSLTWFLAAGMKWGHEAIEANSQYFHLAAWAVPAIKTITILALGQVDGDVLSGVCFVGLNNVDALRGFVLAPLFVYLFIGTSFLLAGFVSLFRIRTIMKHDGTKTEKLEKLMVRIGVFSVLYTVPATIVIACYFYEQAFRDQWERSWVAQSCKSYAIPCPHLQAGGAPPHPPMSPDFTVFMIKYLMTLIVGITSGFWIWSGKTLNSWRKFYTRLTNSKQGETTV*