Part of scaffold_1076 (Scaffold)

For more information consult the page for scaffold_1076 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

POLR3F ENSTTRG00000002580 (Bottlenosed dolphin)

Gene Details

polymerase (RNA) III (DNA directed) polypeptide F, 39 kDa

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000002420, Bottlenosed dolphin)

Protein Percentage 99.32%
cDNA percentage 98.87%
Ka/Ks Ratio 0.14571 (Ka = 0.0033, Ks = 0.0229)

BT.27185 ENSBTAG00000008825 (Cow)

Gene Details

DNA-directed RNA polymerase III subunit RPC6

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000011619, Cow)

Protein Percentage 98.98%
cDNA percentage 95.71%
Ka/Ks Ratio 0.02251 (Ka = 0.0044, Ks = 0.1966)

POLR3F  (Minke Whale)

Gene Details

polymerase (RNA) III (DNA directed) polypeptide F, 39 kDa

External Links

Gene match (Identifier: BACU018640, Minke Whale)

Protein Percentage 99.32%
cDNA percentage 98.87%
Ka/Ks Ratio 0.1459 (Ka = 0.0033, Ks = 0.0229)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 990 bp    Location:245455..260322   Strand:+
>bmy_15002
GCCCCTGTGCCAGCCGCTGTCTTCATAGGTTCCAGGGTTCCCTCGCTTGCTGTCCGGCCACCCGGAGCGTCTCTTCCCCGAGGGGCCGGGACCTGCGCCCTCATGGCCGAGGTGAAGGTGAAGGTGCAGCCGCCCGACGCGGATCCGGTCGAAATCGAAAACAGGATTATAGAATTATGTCACCAGTTCCCTCATGGAATCACAGACCAAGTAATTCAGAATGAAATGCCGCATATAGAAGCCCAGCAGCGGGCAGTGGCCATCAATAGACTGTTGTCCATGGTAAGTAAAATGAAAGGATCAGATAACCAGGAAAAACTAGTATATCAAATCATAGAGGATGCAGGAAATAAAGGAATATGGAGCAGAGATATCCGATACAAAAGCAACTTGCCATTAACAGAAATTAACAAAATTCTAAAGAATTTGGAAAGTAAAAAGCTAATTAAAGCTGTTAAGTCTGTGGCAGCCTCAAAAAAGAAGGTGTACATGCTCTATAACCTGCAGCCAGACCGCTCTGTKACCGGTGGAGCCTGGTACAGTGACCAGGATTTTGAATCTGAATTTGTAGAGGTGCTTAACCARCAGTGTTTTAAATTCCTACAAACCAAGGCAGAAACAGCACGAGAAAGCAAACAGAATCCAATGATACAAAGAAATAGTTCATTTGCTTCATCACATGAAGTGTGGAAGTATATCTGTGAATTGGGGATCAGTAAGGTAGAGTTGTCCATGGAGGACATTGAGACCATCTTGAATACACTCATTTATGATGGGAAAGTGGAGATGACTATCATCGCTGCAAAAGAAGGCACCGTAGGCAGTGTGGACGGACACATGAAACTGTACAGGGCAGTCAATCCAATCATCCCGCCCACGGGATTGGTCCGGGCCCCCTGCGGACTCTGCCCGGTTTTTGACGACTGCCATGAAGGTGGTGAGATTTCACCATCTAACTGTATTTACATGACAGAGTGGCTCGAATTTTAA

Related Sequences

bmy_15002T0 Protein

Length: 330 aa      View alignments
>bmy_15002T0
APVPAAVFIGSRVPSLAVRPPGASLPRGAGTCALMAEVKVKVQPPDADPVEIENRIIELCHQFPHGITDQVIQNEMPHIEAQQRAVAINRLLSMVSKMKGSDNQEKLVYQIIEDAGNKGIWSRDIRYKSNLPLTEINKILKNLESKKLIKAVKSVAASKKKVYMLYNLQPDRSVTGGAWYSDQDFESEFVEVLNQQCFKFLQTKAETARESKQNPMIQRNSSFASSHEVWKYICELGISKVELSMEDIETILNTLIYDGKVEMTIIAAKEGTVGSVDGHMKLYRAVNPIIPPTGLVRAPCGLCPVFDDCHEGGEISPSNCIYMTEWLEF*