Part of scaffold_1076 (Scaffold)

For more information consult the page for scaffold_1076 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SEC23B ENSTTRG00000013211 (Bottlenosed dolphin)

Gene Details

Sec23 homolog B (S. cerevisiae)

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000012541, Bottlenosed dolphin)

Protein Percentage 92.96%
cDNA percentage 92.18%
Ka/Ks Ratio 0.05717 (Ka = 0.002, Ks = 0.0358)

SEC23B ENSBTAG00000018295 (Cow)

Gene Details

Protein transport protein Sec23B

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000024348, Cow)

Protein Percentage 96.74%
cDNA percentage 91.7%
Ka/Ks Ratio 0.04972 (Ka = 0.0167, Ks = 0.3366)

SEC23B  (Minke Whale)

Gene Details

Sec23 homolog B (S. cerevisiae)

External Links

Gene match (Identifier: BACU014869, Minke Whale)

Protein Percentage 98.67%
cDNA percentage 98.63%
Ka/Ks Ratio 0.2229 (Ka = 0.0067, Ks = 0.0302)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 2763 bp    Location:272222..310948   Strand:+
>bmy_15004
ATGCGTCCCCACGCTCAAGGCTCACGCTCCCTTAGCCTCGCCCCTTTCTGCGCGCCGACACCTCCTTCCGGCCAGCTTAGGTTTCCTCCGCAAGGAGTCCCGCCCTCTTCCGGGGCCACACGTCAAAGTTCTCGCTTCCCGAGCCAACCACGTCTGTCTTGCCCTGTTCCAAGATGGCGGCGCAGCCTTTCTAAGTGTCTTGCTTCCGCTCGCCCGCCGGGGAGGCGCTCTTTGATTGGCCAACGGCGGCGCCGTGGCGTGACGTACAGTGCGCTAACCAATCGGCTTAGGGCTGAGCTGGACTTGGCGGTGGGAACTGGAGCCCGGGTCTTGCAGCGGTGGACAATGGCAACATACCTGGAATTCATTCAGCAGAATGAAGAACGCGATGGCGTGCGTTTTAGTTGGAATGTGTGGCCTTCCAGCCGTCTCGAGGCTACAAGAATGGTTGTTCCCCTGGCTTGTATCCTTACTCCTTTGAAAGAACGTCCAGACCTGCCCCCTGTACAGTATGAACCAGTGCTTTGCAGCAGGCCAACTTGCAAAGCCATTCTCAATCCACTTTGTCAGGTTGATTATCGAGCAAAGCTTTGGGCTTGTAATTTCTGTTTCCAAAGAAATCAGTTTCCTCCGGCTTATGCAGGTATATCTGAGGTGAATCAGCCTGCTGAATTGATGCCCCAGTTTTCTACAGTTGAGTACGTGATACAGCGAGGTGCTCAGTCCCCTCTGATCTTTCTCTACGTGGTGGACACATGCCTGGAAGAAGACGACCTCCAGGCACTCAAGGAATCCCTGCAGATGTCCCTGAGTCTCCTTCCTCCGGATGCGCTGGTGGGCTTGATCACGTTTGGGAGGATGGTGCAGGTCCATGAACTCAGCTGTGAGGGGATTTCCAAGAGTTACGTCTTCCGGGGGACGAAGGATTTAACTGCAAAGCAGATACAGGACATGCTGGGCCTGACCAAGCCTGCCGTGCCCGTGCACCCAGCACGCCCGGCACAGCCGCAGGAGCACCTTTCCATTTCCAGCAGATTTCTGCAGCCCATTCACAAGATCGACATGAACCTCACTGATCTTCTTGGGGAGCTGCAGAGGGACCCATGGCCCGTACCTCAGGGGAAGAGACCGTTGCGATCCACTGGCGTTGCTTTGTCCATTGCTGTTGGCTTGTTGGAGGGCACTTTTCCAAACACGGGAGCCAGGATTATGCTGTTTATTGGGGGTCCCCCTACCCAAGGACCTGGCATGGTGGTTGGAGATGAACTAAAGGTTCCTATTCGTTCCTGGCACGATATTGAGAAAGATAACGCCCGCTTCATGAAAAAGGCAACCAAGCACTATGAGATGCTTGCTAACCGAGCTGCTGCAAACGGTCACTGCGTTGATATTTACGCTTGTGCCCTTGATCAGACTGGACTTCTGGAGATGAAGTGCTGCACAAACCTTACTGGGTATGTGGACAGTGAACCCCTGGGGAAAGTGAGAGTGCTTATTCTAAGGAATGAGACAGGCCACATGGTGATGGGAGATTCTTTCAACACCTCTCTCTTCAAGCAGACATTCCAAAGAATTTTTAGTAAAGATTTTAATGGCAATTTCCGAATGGCATTTGGTGCTACGTTGGAAGTAAAGACCTCGCGGGAACTGAAGGTTGCCGGAGCCATCGGCCCTTGTGTGTCTCTGAACGTGAAAGGACCGTGTGTGTCAGAAAACGAGCTTGGTGTCGGTGGCACGAGTCAGTGGAAAATCTGTGGCCTGGATCCCACATCTACGCTCGGCATCTACTTTGAAGTAGTCAATCAGCACAACGCCCCGATCCCGCAGGGGGGCCGCGGCGCCATCCAGTTCGTCACGCACTATCAGCACTCCAGCACCCAGCGGCGCATCCGCGTGACCACCATCGCCCGCARAGCCGGCTCTCGGGCCTCTCCCACATGCACGCGCAGCACTCACTCTGGAATGGTCAGTTGGGCAGATGCACAGAGTCAGCTCAAACACATCGAAGCAGCGTTTGACCAGGAGGCTGCAGCAGTCCTGATGGCGCGGCTGGGAGTGTTCCGAGCGGAGTCGGAGGAGGGGCCGGATGTGCTCCGGTGGCTGGACCGACAGCTCATCCGACTGTGTCAGAAGTTTGGACAGTATACCAAAGAAGACCCCTCATCTTTTAGGTTATCAGATTCCTTCTCTCTATATCCTCAGTTCATGTTCCATCTGAGGAGGTCTCCATTTCTTCAAGTCTTCAACAACAGCCCTGATGAGTCGTCGTATTATCGACACCACTTTGCCCGACAGGACCTAACCCAGTCCCTCATCATGATCCAGCCCATCCTCTACTCCTATTCCTTCCACGGGCCTCCAGAGCCTGTGCTCCTGGACAGTAGCAGCATTCTAGCTGACAGAATTTTGCTGATGGACACATTCTTCCAAATTGTCATTTATCTTGGTGAGACCATAGCCCAGTGGCAGAAAGCGGGCTACCAGGACATGCCTGAGTACGAAAACTTCAAGCACCTTCTGCAGGCACCCCTGGACGATGCTCAGGAGATCCTGCACGCGCGCTTCCCCATGCCGCGGTACATCAACACGGAGCACGGAGGCAGCCAGGCTCGATTCCTTTTGTCCAAAGTGAATCCATCTCAGACACACAACAACCTGTATGCTTGGGGACAGGAAACAGGAGCACCCATCCTGACTGATGACGTCAGCCTGCAGGTGTTCATGGACCATTTGAAGAAACTGGCTGTCTCCAGTGCCTGCTGA

Related Sequences

bmy_15004T0 Protein

Length: 921 aa      View alignments
>bmy_15004T0
MRPHAQGSRSLSLAPFCAPTPPSGQLRFPPQGVPPSSGATRQSSRFPSQPRLSCPVPRWRRSLSKCLASARPPGRRSLIGQRRRRGVTYSALTNRLRAELDLAVGTGARVLQRWTMATYLEFIQQNEERDGVRFSWNVWPSSRLEATRMVVPLACILTPLKERPDLPPVQYEPVLCSRPTCKAILNPLCQVDYRAKLWACNFCFQRNQFPPAYAGISEVNQPAELMPQFSTVEYVIQRGAQSPLIFLYVVDTCLEEDDLQALKESLQMSLSLLPPDALVGLITFGRMVQVHELSCEGISKSYVFRGTKDLTAKQIQDMLGLTKPAVPVHPARPAQPQEHLSISSRFLQPIHKIDMNLTDLLGELQRDPWPVPQGKRPLRSTGVALSIAVGLLEGTFPNTGARIMLFIGGPPTQGPGMVVGDELKVPIRSWHDIEKDNARFMKKATKHYEMLANRAAANGHCVDIYACALDQTGLLEMKCCTNLTGYVDSEPLGKVRVLILRNETGHMVMGDSFNTSLFKQTFQRIFSKDFNGNFRMAFGATLEVKTSRELKVAGAIGPCVSLNVKGPCVSENELGVGGTSQWKICGLDPTSTLGIYFEVVNQHNAPIPQGGRGAIQFVTHYQHSSTQRRIRVTTIARXAGSRASPTCTRSTHSGMVSWADAQSQLKHIEAAFDQEAAAVLMARLGVFRAESEEGPDVLRWLDRQLIRLCQKFGQYTKEDPSSFRLSDSFSLYPQFMFHLRRSPFLQVFNNSPDESSYYRHHFARQDLTQSLIMIQPILYSYSFHGPPEPVLLDSSSILADRILLMDTFFQIVIYLGETIAQWQKAGYQDMPEYENFKHLLQAPLDDAQEILHARFPMPRYINTEHGGSQARFLLSKVNPSQTHNNLYAWGQETGAPILTDDVSLQVFMDHLKKLAVSSAC*