Part of scaffold_1087 (Scaffold)

For more information consult the page for scaffold_1087 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SPOCK1 ENSTTRG00000000496 (Bottlenosed dolphin)

Gene Details

sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000000463, Bottlenosed dolphin)

Protein Percentage 92.99%
cDNA percentage 94.89%
Ka/Ks Ratio 0.3724 (Ka = 0.0395, Ks = 0.1061)

BT.61573 ENSBTAG00000003502 (Cow)

Gene Details

testican-1 precursor

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000004556, Cow)

Protein Percentage 95.47%
cDNA percentage 92.73%
Ka/Ks Ratio 0.07461 (Ka = 0.0224, Ks = 0.2999)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1218 bp    Location:108444..292197   Strand:+
>bmy_15012
ATGTGTAAGAAGGTGATGGTGGCCCTGTCCCTGGCAAGAAAGTGGAGCGGCACAGCCCTGCCCAGTACAGCTCTGGACCCATCCAAAGACCCCTGCCTAAAGGTGAAATGCAGCCCTCACAAGGTGTGTGTGACCCAGGACTACCAGACTGCCCTGTGTGTCAGCCGCAAGCACCTGCTCCCCAGGCAAAAGAAGGGGAATGTAGCCCACAGACACTGGGTTGGACCTTCGAATTTGGTCAAGTGCAAGCCCTGTCCCACGGCACAGTCAGCCATGGTCTGCGGCTCTGACGGCCACACCTATACATCCAAGTGCAAGTTGGAGTTCCATGCTTGTTCTACTGGCAAAAGTCTCACCGCCCTCTGCGACGGGCCCTGTCCATGTCTCCCGGAGCCCAAGCCACCAAAACACAAGGCAGAGAAGAATGAGAGCTCAAAAGAGGAGAAGGCCCACGGACTCACTGTTTCTCCCATCTGCTTTCCTCCAGCCTGCACGGACAAGGAGTTGAGGAACCTCGCTTCCCGGCTCAAAGACTGGTTTGGAGCCCTTCATGAGGATGCAAACAGGGTCGTCAAGCCCACCAGCTCCGACACAGCCCAAGGCAGGTTTGACACCAGCATCCTTCCCATCTGCAAGGACTCCCTGGGCTGGATGTTCAACAAGTTGGACATGAACTATGACCTCCTGCTTGACCACTCAGAGATCAATGCCATCTACCTGGATAAGTACGAGCCCTGTATCAAGCCTCTCTTCAATTCTTGTGACTCCTTCAAGGATGGCAAGCTCTCTAACAATGAGTGGTGCTACTGCTTCCAGAAGCCTGGAGGTCTCCCTTGCCAGAATGAAATGAACAGGATTCAGAAGTTGAGCAAGGGGAAAAGCCTGTTGGGAGCATTCATACCCCGGTGTAATGAGGAGGGCTATTACAAAGCCACGCAGTGCCACGGCAGCACAGRGCAGTGCTGGTGTGTGGATAAATACGGGAACGAGCTGGCTGGCTCCAGGAAACAGGGTGCTGTGAGCTGTGAAGAGGAGCAGGAAACTTCAGGGGATTTTGGCAGTGGCGGCTCTGTGGTCCTGCTGGATGACCTAGAGGATGAATGGGAGCTAGGACCAAAGGACAAAGCGGGGAAGCTGCGGGTGCACGCCCGGGCAGTGACGGAGGATGATGAGGACGAGGACGACGAGAAAGAGGACGAGGTCGGGTACATATGGTAG

Related Sequences

bmy_15012T0 Protein

Length: 406 aa      View alignments
>bmy_15012T0
MCKKVMVALSLARKWSGTALPSTALDPSKDPCLKVKCSPHKVCVTQDYQTALCVSRKHLLPRQKKGNVAHRHWVGPSNLVKCKPCPTAQSAMVCGSDGHTYTSKCKLEFHACSTGKSLTALCDGPCPCLPEPKPPKHKAEKNESSKEEKAHGLTVSPICFPPACTDKELRNLASRLKDWFGALHEDANRVVKPTSSDTAQGRFDTSILPICKDSLGWMFNKLDMNYDLLLDHSEINAIYLDKYEPCIKPLFNSCDSFKDGKLSNNEWCYCFQKPGGLPCQNEMNRIQKLSKGKSLLGAFIPRCNEEGYYKATQCHGSTXQCWCVDKYGNELAGSRKQGAVSCEEEQETSGDFGSGGSVVLLDDLEDEWELGPKDKAGKLRVHARAVTEDDEDEDDEKEDEVGYIW*