Part of scaffold_1103 (Scaffold)

For more information consult the page for scaffold_1103 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

NPHP3 ENSTTRG00000015497 (Bottlenosed dolphin)

Gene Details

nephronophthisis 3 (adolescent)

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000014694, Bottlenosed dolphin)

Protein Percentage 82.49%
cDNA percentage 82.91%
Ka/Ks Ratio 0.48008 (Ka = 0.0166, Ks = 0.0346)

NPHP3 ENSBTAG00000005769 (Cow)

Gene Details

nephrocystin-3

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000007584, Cow)

Protein Percentage 96.35%
cDNA percentage 95.08%
Ka/Ks Ratio 0.14239 (Ka = 0.0199, Ks = 0.1399)

NPHP3  (Minke Whale)

Gene Details

nephronophthisis 3 (adolescent)

External Links

Gene match (Identifier: BACU008808, Minke Whale)

Protein Percentage 93.87%
cDNA percentage 95.2%
Ka/Ks Ratio 0.77259 (Ka = 0.0473, Ks = 0.0612)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 4014 bp    Location:122439..164362   Strand:+
>bmy_15013
ATGGGGACTGCCTCGTCGCTCGTGAGCCCCGCCGGCGGGGAGGTGATCGAGGACACGTATGGGGCGGGCGGCGGCGAGGCCTGCGAGATCCCGGTGGAGGTGAAGCCCAAGGCTCGCCTGCTGCGCAGCTCGTTCCGCCGGGGCGCGGGGGCGGCGGCGGGGGCCGGGCCGGGTTCGCTGCCCCGCGGGGCGGGCGGCGGCGGGCTGCTGGGGGCCAGTTTCAAGTCCACTGGCTCGTCGGTGCCCGAGCTGGAGTACGCGGCGGCTGAGTACGAGCGGCTGAAGAAGGAGTACGAGATCTTCCGGGTCAGCAAGAACCAGGAGTTGTTATCCATGGGCCGCCGCGAGGCCAAGCTGGACACGGAGAACAAGCGGCTGCGGGCAGAGCTGCAGAATGGCAATATGCCATTCTTGATAACTGGTGAAAAAGCACTTCAGAAAACTTACCAGAAGATACTTCGGGAAAAGGAAAGTGCTTTAGAAGCAAAATATCAAGCAATGGAGAGAGCAGCTACATTTGAACATGACAGAGATAAAGTTAAGAGGCAATTTAAGATTTTTAGGGAGACCAAGGAAAATGAAATTCAGGATTTATTGAGGGCCAAGCGAGAGTTGGAGAGTAAACTTCAGAGGCTACACGTTCAGGGGATCCATGTATTTGATCCTGGAGAGTCTGATTCAGATGACAACTGTACAGATGTTACTGCTGCTGGACCCCAGTGCGAGTATTGGACTGGTGGAGCCTTGGGAAGTGAGCCCTCCATAGGGAGTATGATTCAGCTTCAGCAGTCTTTCCGGGGCCCTGAGTTTGCCCATAGTTCTATAGATATAGAAGGACCCTTTGCTAACGTCAACAGAGATGACTGGGATATTGCTGTAGCTAGTTTATTACAAGTTACCCCCTTGTTTTCACATTCTCTGTGGAGTAACACTGTCAGATGTTACCTCATTTATACAGATGAAACCCAGCCCGAAACTGATCTTTTCCTTAAGGACTATTCACCTAAACTTAAAAGAATGTGTGAGACAATGGGATACTTTTTCAATACTGTGTATTTTCCAATTGATACTGAAAATCAGTACCTCACTGTAAGAAAATGGGAAATTGAGAAGAGTTCATTAGTTATCTTATTCATTCATTTAACCTTACCAAGCTTTGGAATGCTCATACCCAAAAAGATCATTGATCACTCAGGAGATCCTGCAGAAGGAGTCTATAAAACCTATATTTATGTAGAAAAGATTATTAAACAGGACATCCTGGGCTTTGAAAATACAGACCTGGAAACTAAGGATTTGGGCAGTGAAGATTCTATTCCAGAAGAAGATGATTTTGGTGATGTTCTGTGGGACATACATGATGAACAAGAGCAAATGGAAGCTTTTCAGCAGGCTTCAAATTCAGCCCATGAGTTGGGATTCGAGAAATATTACCAACGCCTTAATGATCTAGTGGCAGCACCAGCACCAATTCCACCCCTTCTTGTATCTGGAGGACCAGGCTCTGGAAAGTCCCTTCTTTTATCAAAGTGGATCCAGTTACAACAGAAGAATTCCCCTAACACACTAATTCTTTCTCATTTTGTGGGGAGGCCCATGTCAACCAGCTCAGAGTCTTCCTTGATTATTAAACGACTGACTCTAAAGTTGATGCAGCACTCTTGGTCAGTATCTGCTCTGACACTGGATCCTGCTAAGCTTCTGGAAGAATTTCCACATTGGCTGGAAAAACTCTCTGCCCGTCATCAAGGCAGCATCATCATCATTATTGATTCTATAGATCAAATTCAGCAAGTTGAAAAACACATGAAATGGCTGATAGATCCACTGCCAGTGAATGTAAGAGTAATTGTTTCTGTGAATGTGGAAACATGCCCTCCAGCATGGAGGTTGTGGCCTACACTTCATCTTGACCCTTTAAATCCGAAAGATGCAAAATCTATTATAATCGCAGAATGCCACTCTGTAGACATTAAATTGAGTAAAGAGCAGGAGAAGAAGCTAGAACGACACTGTCGTTCTGCTACAACCTGCAATGCCCTTTATGTCACTCTTTTCGGCAAAATGATTGCGTGTGCTGGGAGAGCAGGCAATTTAGATAAAACCCTTCTTCAGTGTCTCCAGTGTCAAGATACTGTTTCATTATATAGACTTGTTCTTCGATCTATCCAGGAGTCCATGACAAATGATACAGATAAAGAGCTAATGAAACAGATTCTCTGCCTTGTAAATGTTAGTCACAATGGTGTGAGTGAATCAGAATTGATGGAACTCTATCCTGAGCTGTCCTGGGCTGTCTTGACCTCCCTTATTCACAGTTTACACAAAATGTGTTTGTTGACTTATGGTTGTGGTTTGCTCAAGTTTCAACATCTACAGGCTTGGGAAACAGTGAGACTAGAGTACGTGGAAGGTCCCACCATTATTTCTTCATATAGGCAAAAGCTAACCAACTATTTCACCATGCAGCTAAGTCAGGACCGAGTGACTTGGAGGAGTGCAGATGAACTGCCTTGGCTATTCCAGCAGCAGGCAAGTAAACAGAAGCTGCACGATTGCCTTCTTAACCTCTTCGTGTCTCAAAACCTCTATAAAAGAGGACACTTTGCTGAGTTGCTGAGTTACTGGCAGTTTGTTGGCAAAGACAAAAGCGCGATGGCAGCAGAATACTTTGATTCATTGAAGCAGTATGAGAAAAACTGTGAAGGCGAGGAGAGCATGATTTGCTTAGCTGACCTTTATGAAACCCTGGGGCGATTTCTCAAGGATCTAGGCCTTCTCAGTCAGGCTGTGGTGCCTTTGCAGAGGTCTCTAGAAATTCGAGAAACAGCTTTAGATCCAGATCACCCACGAGTAGCTCAGTCCCTCCACCAACTAGCGAGTGTGTACGTGCAGTGGAAGAAGTTTGGCAATGCTGAACAACTATATAAACAGGCATTGGAAATCTCAGAAAATGCCTATGGTGCGGACCATCCACATATTGCTCGCGAACTTGAAGCACTTGCAACTTTGTACCAGAAACAAAATAAATATGAACAAGCTGAACATTTTAGAAAAAAATCTTTTAAAATTCGTCAGAAAGCTACAAGGAGAAAAGGCAACTTGTATGGATTTGCCCTTTTACGTAGACGGGCCCTACAGTTAGAAGAGCTCACGTTAGGTAAGGATACACCTGACAATGCTCGGACCCTCAATGAACTGGGTGTGCTCTACTATCTTCAGAACAACCTGGAAACAGCTGACCAGTTTCTGAAGCGTTCCTTGGAGATGAGGGAGCGAGTTCTAGGACCAGATCACCCTGACTGTGCCCAGTCTTTGAATAATCTAGCGGCTCTATGCAATGAAAAGAAACAGTATGATAAAGCAGAAGAACTTTATGAAAGAGCCTTAGACATTCGGAGACGAGCATTAGCTCCTGATCACCCTTCTTTGGCTTATACAGTGAAGCATCTTGCAGTCTTGTATAAGAAAATGGGGAAACTTGACAAAGCTGTACCTTTGTATGAGCTGGCTGTTGAAATCCGGCAGAAATCCTTTGGCCCAAAGCACCCTAGTGTAGCTACTGCCTTGGTGAACTTAGCTGTTCTTTATAGCCAAATGGAGAATATTAACTTTTTAAAAGTGCTTACCCAAGTAGGTCAGCTTAGTCTAGAATACCTTAATAGTAATTTCAGAAACGCAGTGTGTTCAAGTGAGCATTGTTTCTTTTTTAATAAGAAAAAACACATTGAGGCCTTGCCGTTATATGAAAGAGCATTAAAGATTTATGAGGACAGCCTGGGTCGGATGCATCCTCGAGTTGGAGAAACATTAAAAAATTTAGCTGTGCTTAGCTATGAAGAAGGGGATTTCGAAAAAGCTGCTGAACTATACAGAAGGGCAATGGAAATAAAAGAAGCAGAAACGTCTCTTTTGGGTGGAAAAGCTCCCTCCCGACATTCATCAAGTGGAGATACGGTTAGCTTAAAAACAACCCATTCTCCTAATGTTTTCCTTCATCAAGGACAAAGGTAA

Related Sequences

bmy_15013T0 Protein

Length: 1338 aa      View alignments
>bmy_15013T0
MGTASSLVSPAGGEVIEDTYGAGGGEACEIPVEVKPKARLLRSSFRRGAGAAAGAGPGSLPRGAGGGGLLGASFKSTGSSVPELEYAAAEYERLKKEYEIFRVSKNQELLSMGRREAKLDTENKRLRAELQNGNMPFLITGEKALQKTYQKILREKESALEAKYQAMERAATFEHDRDKVKRQFKIFRETKENEIQDLLRAKRELESKLQRLHVQGIHVFDPGESDSDDNCTDVTAAGPQCEYWTGGALGSEPSIGSMIQLQQSFRGPEFAHSSIDIEGPFANVNRDDWDIAVASLLQVTPLFSHSLWSNTVRCYLIYTDETQPETDLFLKDYSPKLKRMCETMGYFFNTVYFPIDTENQYLTVRKWEIEKSSLVILFIHLTLPSFGMLIPKKIIDHSGDPAEGVYKTYIYVEKIIKQDILGFENTDLETKDLGSEDSIPEEDDFGDVLWDIHDEQEQMEAFQQASNSAHELGFEKYYQRLNDLVAAPAPIPPLLVSGGPGSGKSLLLSKWIQLQQKNSPNTLILSHFVGRPMSTSSESSLIIKRLTLKLMQHSWSVSALTLDPAKLLEEFPHWLEKLSARHQGSIIIIIDSIDQIQQVEKHMKWLIDPLPVNVRVIVSVNVETCPPAWRLWPTLHLDPLNPKDAKSIIIAECHSVDIKLSKEQEKKLERHCRSATTCNALYVTLFGKMIACAGRAGNLDKTLLQCLQCQDTVSLYRLVLRSIQESMTNDTDKELMKQILCLVNVSHNGVSESELMELYPELSWAVLTSLIHSLHKMCLLTYGCGLLKFQHLQAWETVRLEYVEGPTIISSYRQKLTNYFTMQLSQDRVTWRSADELPWLFQQQASKQKLHDCLLNLFVSQNLYKRGHFAELLSYWQFVGKDKSAMAAEYFDSLKQYEKNCEGEESMICLADLYETLGRFLKDLGLLSQAVVPLQRSLEIRETALDPDHPRVAQSLHQLASVYVQWKKFGNAEQLYKQALEISENAYGADHPHIARELEALATLYQKQNKYEQAEHFRKKSFKIRQKATRRKGNLYGFALLRRRALQLEELTLGKDTPDNARTLNELGVLYYLQNNLETADQFLKRSLEMRERVLGPDHPDCAQSLNNLAALCNEKKQYDKAEELYERALDIRRRALAPDHPSLAYTVKHLAVLYKKMGKLDKAVPLYELAVEIRQKSFGPKHPSVATALVNLAVLYSQMENINFLKVLTQVGQLSLEYLNSNFRNAVCSSEHCFFFNKKKHIEALPLYERALKIYEDSLGRMHPRVGETLKNLAVLSYEEGDFEKAAELYRRAMEIKEAETSLLGGKAPSRHSSSGDTVSLKTTHSPNVFLHQGQR*