Part of scaffold_1083 (Scaffold)

For more information consult the page for scaffold_1083 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CCT5 ENSTTRG00000011018 (Bottlenosed dolphin)

Gene Details

chaperonin containing TCP1, subunit 5 (epsilon)

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000010429, Bottlenosed dolphin)

Protein Percentage 99.26%
cDNA percentage 98.21%
Ka/Ks Ratio 0.08126 (Ka = 0.0043, Ks = 0.0529)

BT.68634 ENSBTAG00000017889 (Cow)

Gene Details

T-complex protein 1 subunit epsilon

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000023778, Cow)

Protein Percentage 97.6%
cDNA percentage 92.61%
Ka/Ks Ratio 0.03369 (Ka = 0.0111, Ks = 0.3292)

CCT5  (Minke Whale)

Gene Details

chaperonin containing TCP1, subunit 5 (epsilon)

External Links

Gene match (Identifier: BACU012894, Minke Whale)

Protein Percentage 98.52%
cDNA percentage 97.78%
Ka/Ks Ratio 0.10763 (Ka = 0.0069, Ks = 0.0639)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1758 bp    Location:124248..137818   Strand:+
>bmy_15022
GTGAGAAATAAGTCTCAGGCGTCCTGTACTGCGCATGCGCGAGCTTTTGCGCCCGCCCGCSAGAGCAGAGTGTGTTCTTGCTTCCGCGGTAGCTTCCGCCGGTTGCGGGAGAGTAACTGCTGTGGCTGCATCATGGCGTCCATGGGGACCCTCGCCTTCGATGAATATGGCCGCCCTTTCCTCATCATCAAGGATCAGGACCGCAAGTCTCGTCTTATGGGACTTGAGGCCCTCAAGTCTCATATAATGGCAGCAAAGGCTGTAGCAAATACAATGAAAACATCACTTGGACCAAATGGGCTCGATAAGATGATGGTGGATAAGGATGGCGACGTGACCGTAACTAAYGACGGTGCCACCATCTTAAGCATGATGGATGTCGATCATCAGATCGCCAAGCTGATGGTCGAACTGTCCAAATCACAGGATGATGAAATTGGAGATGGAACCACAGGAGTGGTTGTCCTGGCTGGTGCCCTGTTGGAAGAGGCCGAGCAGCTGCTGGACCGCGGCATTCACCCCATCAGGATCGCCGATGGCTACGAGCAGGCCGCCCGCATCGCTATCGAGTACCTGGACAAGATCAGCGATAGTGTCCTCGTCGACGTGAAGGACACCGAGCCCCTGATCCAGACCGCGAAGACCACGCTGGGCTCCAAAGTGGTTAACAGCTGTCACCGACAAATGGCCGAGATTGCCGTGAACGCCGTCCTCACTGTGGCCGACATGCAGCGCAGAGACGTTGACTTTGAGCTCATCAAAGTRGAAGGCAAAGTGGGCGGGAGGCTGGAGGACACCAAGCTGATCAAGGGCGTGATCGTGGACAAGGATTTCAGTCACCCGCAGATGCCCAAACAAGTGGAAGATGCTAAGATTGCCATCCTCACGTGTCCATTTGAACCGCCGAAACCAAAGACGAAGCATAAGCTGGATGTGACGTCTGTAGAAGATTTTAAAGCCCTTCAGAAATATGAAAAGGAGAAGTTTGAGGAGATGATTCGGCAGATTAAAGAAACTGGCGCTAACCTAGCCATTTGCCAGTGGGGCTTTGACGACGAAGCAAATCATTTACTCCTTCAGAATAACCTGCCTGCGGTTCGTTGGGTCGGAGGCCCTGAAATCGAGCTGATCGCCATCGCCACGGGCGGCCGCATCGTCCCGAGGTTCTCAGAGCTCACGGCCGAGAAGCTGGGCTTTGCGGGTCTTGTGAAGGAGATTTCATTCGGGACCACTAAAGACAAGATGCTGGTCATCGAGCAGTGCAAGAACTCCAGAGCCGTCACCATTTTCATCAGAGGAGGAAATAAGATGATCATCGAGGAAGCCAAACGATCCCTTCACGATGCTCTGTGTGTCATCCGGAACCTCATCCGTGACAACCGCGTGGTGTACGGCGGAGGCGCTGCCGAGGTTGCCTGTGCTCTGGCCGTCAGCCAGGAGGCCGACAAGTGCCCGACCTTGGAGCAGTACGCCATGCGAGCCTTCGCCGACGCTCTGGAGGTCATCCCCATGGCCCTCGCCGAAAACAGCGGCATGAATCCCATCCAGACTATGACCGAAGTCCGAGCCAAACAAGTGAAGGAGATGAACCCTGCCCTCGGGATTGACTGCATGCACAGGGGGACAAACGATATGAAGCAACAACACGTCATAGAAACCTTGATTGGCAAAAAGCAACAGATCTCTCTTGCAACACAAGTGGTTAGAATGATTTTGAAGATTGATGACATCCGTAAGCCTGGAGAATCTGAAGAATAA

Related Sequences

bmy_15022T0 Protein

Length: 586 aa      View alignments
>bmy_15022T0
VRNKSQASCTAHARAFAPARZSRVCSCFRGSFRRLRESNCCGCIMASMGTLAFDEYGRPFLIIKDQDRKSRLMGLEALKSHIMAAKAVANTMKTSLGPNGLDKMMVDKDGDVTVTNDGATILSMMDVDHQIAKLMVELSKSQDDEIGDGTTGVVVLAGALLEEAEQLLDRGIHPIRIADGYEQAARIAIEYLDKISDSVLVDVKDTEPLIQTAKTTLGSKVVNSCHRQMAEIAVNAVLTVADMQRRDVDFELIKVEGKVGGRLEDTKLIKGVIVDKDFSHPQMPKQVEDAKIAILTCPFEPPKPKTKHKLDVTSVEDFKALQKYEKEKFEEMIRQIKETGANLAICQWGFDDEANHLLLQNNLPAVRWVGGPEIELIAIATGGRIVPRFSELTAEKLGFAGLVKEISFGTTKDKMLVIEQCKNSRAVTIFIRGGNKMIIEEAKRSLHDALCVIRNLIRDNRVVYGGGAAEVACALAVSQEADKCPTLEQYAMRAFADALEVIPMALAENSGMNPIQTMTEVRAKQVKEMNPALGIDCMHRGTNDMKQQHVIETLIGKKQQISLATQVVRMILKIDDIRKPGESEE*