Sequence detailsbmy_15032 (Coding sequence)

Part of scaffold_1092 (SequenceType object (1))

For more information consult the page for scaffold_1092 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CCL8ENSBTAG00000014113 (Cow)

Gene Details

C-C motif chemokine 8

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000018757, Cow)

Protein Percentage 80.81%
cDNA percentage 89.23%
Ka/Ks Ratio 0.58051 (Ka = 0.1024, Ks = 0.1765)

CCL8 (Minke Whale)

Gene Details

chemokine (C-C motif) ligand 8

External Links

Gene match (Identifier: BACU013946, Minke Whale)

Protein Percentage 96.97%
cDNA percentage 97.64%
Ka/Ks Ratio 0.3378 (Ka = 0.0142, Ks = 0.0421)

Additional orthologs identified in other species via the OPTIC pipeline.

CCL8 (Human)  

Genome Location

Sequence SequenceType object (2)

Length: 591 bp    Location:129204..127220   Strand:-
Raw sequence 
>bmy_15032
ATGAAGGTCTCTGCAGCACTTCTGTGTCTGCTGCTTGCAGCAGCTGCCTTCAGCACCCAGGTGCTGGCTCAGCCAGATGGAGAGAATGAAATCCAGAGGGGAATTAAGAAGAGCTGGCATGTCACAACTKGTCAGAGGCAGAACCAGAGCTGGAAGCCCAGGCCACTGGAGCCAGGCTCCACGATCTTTCTCGACACCAGCTTTGGGACATTAAATGTAGCTGCTATCTCAACAATCCTCACCTTGTTTGGAGATGTGGCACAGAAGGAAGAACCATTTCTCATTGTGGGCAGGAAGGACAGTTCGGGCAGTAGTAGAGAGGAAGAAACTCTTGCTGGAGGTTTCAAATGTTGGATTACGGTCCAGGATTCAGTTTCCATCCCAATCACTTGCTGCTTTACTGTGATCAGTAGGAAGATCCCCTTCAAGAAGCTGGACAGCTACACGAGAATCACCAACAGCTGGTGTCCCCAGGAAGCTGTGATCTTCAAGACCAAAGCGGACAAGGAGGTCTGTGCTGACCCCAAGCAGAAGTGGGTYCAGAATTCCATAAAGTTCCTGGATCAAAAGTCCCAAGCCCTGAAGGCTTGA

Related Sequences

bmy_15032T0 SequenceType object (3)

Length: 197 aa      View alignments
>bmy_15032T0
MKVSAALLCLLLAAAAFSTQVLAQPDGENEIQRGIKKSWHVTTXQRQNQSWKPRPLEPGSTIFLDTSFGTLNVAAISTILTLFGDVAQKEEPFLIVGRKDSSGSSREEETLAGGFKCWITVQDSVSIPITCCFTVISRKIPFKKLDSYTRITNSWCPQEAVIFKTKADKEVCADPKQKWVQNSIKFLDQKSQALKA*