Sequence details bmy_15033 (Coding sequence)

Part of scaffold_1092 (Scaffold)

For more information consult the page for scaffold_1092 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CCL11 ENSTTRG00000014489 (Bottlenosed dolphin)

Gene Details

chemokine (C-C motif) ligand 11

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000013736, Bottlenosed dolphin)

Protein Percentage 64.52%
cDNA percentage 72.4%
Ka/Ks Ratio 0.65249 (Ka = 0.2222, Ks = 0.3405)

CCL11 ENSBTAG00000004129 (Cow)

Gene Details

Eotaxin

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000005406, Cow)

Protein Percentage 61.29%
cDNA percentage 73.84%
Ka/Ks Ratio 0.93933 (Ka = 0.349, Ks = 0.3716)

CCL11  (Minke Whale)

Gene Details

chemokine (C-C motif) ligand 11

External Links

Gene match (Identifier: BACU013944, Minke Whale)

Protein Percentage 79.57%
cDNA percentage 83.87%
Ka/Ks Ratio 0.59298 (Ka = 0.1641, Ks = 0.2768)

Additional orthologs identified in other species via the OPTIC pipeline.

CCL11 (Human)  

Genome Location

Sequence Coding sequence

Length: 279 bp    Location:166596..165919   Strand:-
Raw sequence 
>bmy_15033
ATGCTTAAAAATTATCTACATATCATTAGTGCTCAGTCTTTCTATTCATTTCTCCCCGGTTCAGCTTCTGTCCCAACCGTCTGCTGCTTTAATGTGGCCAGAAGGAAGATCTCCTTTCAGCGACTGCAGAGCTACAGAAGAATCACCGACAGCAAATGTCCCCAGAGAGCTGTGATCTTCAGCACCAAGCAGGCCAAGAAGTTCTGTGTTGATCCCCAGGAGAAGTGGGTCCAGGATGCCATGAAGTACCTGGACCAAAAATTCCAAACTTTAAAGCCA

Related Sequences

bmy_15033T0 Protein

Length: 93 aa      View alignments
>bmy_15033T0
MLKNYLHIISAQSFYSFLPGSASVPTVCCFNVARRKISFQRLQSYRRITDSKCPQRAVIFSTKQAKKFCVDPQEKWVQDAMKYLDQKFQTLKP