Sequence details bmy_15034 (Coding sequence)

Part of scaffold_1092 (Scaffold)

For more information consult the page for scaffold_1092 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CCL2 ENSTTRG00000014487 (Bottlenosed dolphin)

Gene Details

chemokine (C-C motif) ligand 2

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000013734, Bottlenosed dolphin)

Protein Percentage 93.94%
cDNA percentage 96.63%
Ka/Ks Ratio 0.55065 (Ka = 0.0296, Ks = 0.0537)

CCL2 ENSBTAG00000037811 (Cow)

Gene Details

C-C motif chemokine 2

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000013146, Cow)

Protein Percentage 83.84%
cDNA percentage 88.22%
Ka/Ks Ratio 0.29775 (Ka = 0.0891, Ks = 0.2992)

CCL2  (Minke Whale)

Gene Details

chemokine (C-C motif) ligand 2

External Links

Gene match (Identifier: BACU013942, Minke Whale)

Protein Percentage 96.97%
cDNA percentage 97.98%
Ka/Ks Ratio 0.34046 (Ka = 0.014, Ks = 0.0411)

Additional orthologs identified in other species via the OPTIC pipeline.

CCL2 (Human)   Ccl12 (Mouse)  

Genome Location

Sequence Coding sequence

Length: 351 bp    Location:189459..187620   Strand:-
Raw sequence 
>bmy_15034
ATGAAGGTGTCCGCAGCCCTCCTGTGTCTACTGCTCACAGCAGCCGCCTTCAGCACCCAGGTGCTCGCTCAGCCAGAAAGAACCTACTCCATCCTAAAGTGCTTTTTCTTTGTGGTTCTATTTCCAGATGCAATTAACTCCCCAGTCACCTGCTGCTATACACTCACCAATAAGAAGATCTCGACACAGAGGCTGATGAGCTATAGAAGAGTCACCAGCAGCAAGTGTCCCAAAGAAGCTGTGATCTTCAAGACCATACTGGGCAAGGAGATCTGTGCAGACCCCAAGCAGAAGTGGGTCCAGGACTCCATGAGACATCTGGATAAGACAAGGCAAACTCCAAAGCCTTGA

Related Sequences

bmy_15034T0 Protein

Length: 117 aa      View alignments
>bmy_15034T0
MKVSAALLCLLLTAAAFSTQVLAQPERTYSILKCFFFVVLFPDAINSPVTCCYTLTNKKISTQRLMSYRRVTSSKCPKEAVIFKTILGKEICADPKQKWVQDSMRHLDKTRQTPKP*