Part of scaffold_1084 (Scaffold)

For more information consult the page for scaffold_1084 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

AGPAT4 ENSTTRG00000012034 (Bottlenosed dolphin)

Gene Details

1-acylglycerol-3-phosphate O-acyltransferase 4

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000011412, Bottlenosed dolphin)

Protein Percentage 72.82%
cDNA percentage 77.63%
Ka/Ks Ratio 0.38078 (Ka = 0.2182, Ks = 0.5731)

AGPAT4 ENSBTAG00000007668 (Cow)

Gene Details

1-acyl-sn-glycerol-3-phosphate acyltransferase delta

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000010089, Cow)

Protein Percentage 70.81%
cDNA percentage 74.83%
Ka/Ks Ratio 0.25293 (Ka = 0.225, Ks = 0.8895)

AGPAT4  (Minke Whale)

Gene Details

1-acylglycerol-3-phosphate O-acyltransferase 4

External Links

Gene match (Identifier: BACU011740, Minke Whale)

Protein Percentage 60.87%
cDNA percentage 67.79%
Ka/Ks Ratio 0.21206 (Ka = 0.3435, Ks = 1.62)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 897 bp    Location:474785..459477   Strand:-
>bmy_15057
ATGGCTTTGTCAGCCCCGTTAAGCTGGATTCCGGCATCCTCAGGTGGGTCTGTAGAAGACTTCTCCACCTCCCACTCCCACCTGGTCAATCGGTTAACGGCTGTGATCAGGCAGGTGACTGAAGGGCAGGGAGCGGGGACCATGAAAACATCCCTGCTGACAGGAGGGGACGGCTGCGGAGCGGGCCAGGAGGCCTCCCACAGCCTGAAACCCACCCGTGGACTCAGCGGATGGCCTTTAGATGGCTCCTGTGGGGGAGTGGGCTCCAAGGTCCTGGCCAAGAAGGAGCTGGCCTACGTCCCCATAATCGGCTGGATGTGGTACTTCACGGAGATGGTCTTCTGCACGCGCAAGTGGGAGCAGGACCGCAAGACCGTCTCTGAGAGCCTGCTGCACCTGCGGGACTACCCCGAGAAGTACTTCTTCCTGATTCACTGCGAGGGCACGCGGTTCACGGAGAAGAAGCACCAGATAAGCATGCAGGTGGCCCAGGCCAAGGGGCTGCCCAGCCTCAAGCACCACCTGCTGCCTCGCACCAAGGGCTTCGCCATCACCGTGAGGAGTTTGAGAAATGTAGTTTCAGCTGTATATGACTGTACACTCAATTTCAGAAATAATGAAAATCCAACACTGCTGGGAGTCCTAAATGGAAAGAAATACCACGCAGATTTATACGTTAGGCGGATCCCTTTAGGAGAAGTCCCAGAAGATGAGGACAGGTGCGCGGCCTGGCTGCACAAGCTCTACCAGGAGAAGCAGCGGCTCCTCCCTGACGCTGGCCAGTTTCGTCCTCGTCTTCTTCCTTCCGTGGGGGTCCGATGGATGATTGGCGTCACAGAAATTGACAAGGGCTCCGCCTACGGCAACATGGACAGCAAACAGAAACACAGCGACTGA

Related Sequences

bmy_15057T0 Protein

Length: 299 aa      View alignments
>bmy_15057T0
MALSAPLSWIPASSGGSVEDFSTSHSHLVNRLTAVIRQVTEGQGAGTMKTSLLTGGDGCGAGQEASHSLKPTRGLSGWPLDGSCGGVGSKVLAKKELAYVPIIGWMWYFTEMVFCTRKWEQDRKTVSESLLHLRDYPEKYFFLIHCEGTRFTEKKHQISMQVAQAKGLPSLKHHLLPRTKGFAITVRSLRNVVSAVYDCTLNFRNNENPTLLGVLNGKKYHADLYVRRIPLGEVPEDEDRCAAWLHKLYQEKQRLLPDAGQFRPRLLPSVGVRWMIGVTEIDKGSAYGNMDSKQKHSD*