Sequence detailsbmy_15065 (Coding sequence)

Part of scaffold_1093 (SequenceType object (1))

For more information consult the page for scaffold_1093 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

ZIC1ENSBTAG00000014751 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000019626, Cow)

Protein Percentage 91.05%
cDNA percentage 90.38%
Ka/Ks Ratio 0.21494 (Ka = 0.0696, Ks = 0.3237)

ZIC1 (Minke Whale)

Gene Details

Zic family member 1

External Links

Gene match (Identifier: BACU012791, Minke Whale)

Protein Percentage 99.5%
cDNA percentage 99.26%
Ka/Ks Ratio 0.08837 (Ka = 0.003, Ks = 0.0334)

Additional orthologs identified in other species via the OPTIC pipeline.

ZIC1 (Human)   Zic1 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1344 bp    Location:644187..647845   Strand:+
Raw sequence 
>bmy_15065
ATGCTCCTGGACGCCGGCCCCCAGTACCCCGCGATCGGCGTGACCACCTTTGGCGCGTCCCGCCACCACTCGGCGGGCGACGTGGCCGAGCGCGACGTGGGCCTGGGCATCAACCCGTTCGCCGACGGCATGGGTGCCTTCAAGCTCAACCCCAGCTCGCACGAGCTGGCCTCCGCGGGCCAGACGGCCTTCACGTCTCAGGCTCCCGGCTACGCGGCTGCGGCGGCCCTGGGACATCACCACCATCCGGGCCACGTCGGCTCCTATTCGAGCGCAGCCTTCAACTCCACACGGGACTTTCTGTTCCGCAACCGGGGCTTTGGCGACGCGGCGGCTGCAGCCAGCGCGCAACACAGTCTGTTCGCTGCTTCAGCCGGGGGCTTCGGGGGCCCACACGGCCACACGGACGCCGCGGGCCACCTCCTCTTCCCCGGCCTTCACGAGCAGGCGGCGGGCCATGCATCGCCCAACGTGGTCAATGGGCAGATGAGGCTTGGCTTCTCGGGGGACATGTACCCGCGGCCCGAGCAGTATGGCCAGGTGACCAGTCCGCGTTCAGAGCACTATGCCGCGCCGCAGCTGCACGGCTACGGGCCCATGAACGTGAACATGGCCGCGCATCACGGCGCCGGCGCCTTCTTCCGCTATATGCGCCAGCCCATCAAACAGGAGCTCATCTGCAAGTGGATTGAGCCCGAGCAGCTGGCCAACCCCAAAAAGTCGTGCAACAAAACTTTCAGCACCATGCACGAGCTGGTCACGCACGTCACAGTGGAGCACGTCGGCGGACCCGAGCAGAGTAACCACATCTGCTTCTGGGAGGAGTGTCCGCGCGAGGGCAAGCCCTTCAAAGCCAAATACAAACTGGTCAACCACATCCGCGTGCACACGGGCGAGAAGCCCTTCCCCTGCCCCTTCCCTGGCTGCGGCAAGGTCTTCGCCCGTTCTGAGAACTTAAAGATCCACAAAAGGACGCACACAGGGGAGAAGCCCTTCAAGTGCGAGTTCGAGGGCTGCGACCGACGCTTCGCCAATAGCAGCGATCGTAAGAAGCACATGCACGTGCACACGAGTGACAAGCCCTATCTTTGCAAGATGTGCGACAAATCCTACACGCACCCCAGCTCGTTGCGCAAACACATGAAGGTCCACGAATCCTCCTCGCAGGGCTCGCAACCTTCGCCGGCCGCCAGCTCGGGCTATGAGTCCTCCACGCCGCCCACCATCGTGTCTCCCTCCACAGACAACCCGACCACCAGCTCCCTGTCGCCCTCCTCCTCCGCGGTCCACCACACAGCCGGCCACAGCGCGCTCTCTTCCAATTTTAACGAATGGTACGTTTAA

Related Sequences

bmy_15065T0 SequenceType object (3)

Length: 448 aa      View alignments
>bmy_15065T0
MLLDAGPQYPAIGVTTFGASRHHSAGDVAERDVGLGINPFADGMGAFKLNPSSHELASAGQTAFTSQAPGYAAAAALGHHHHPGHVGSYSSAAFNSTRDFLFRNRGFGDAAAAASAQHSLFAASAGGFGGPHGHTDAAGHLLFPGLHEQAAGHASPNVVNGQMRLGFSGDMYPRPEQYGQVTSPRSEHYAAPQLHGYGPMNVNMAAHHGAGAFFRYMRQPIKQELICKWIEPEQLANPKKSCNKTFSTMHELVTHVTVEHVGGPEQSNHICFWEECPREGKPFKAKYKLVNHIRVHTGEKPFPCPFPGCGKVFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVHTSDKPYLCKMCDKSYTHPSSLRKHMKVHESSSQGSQPSPAASSGYESSTPPTIVSPSTDNPTTSSLSPSSSAVHHTAGHSALSSNFNEWYV*