Sequence detailsbmy_15070 (Coding sequence)

Part of scaffold_1097 (SequenceType object (1))

For more information consult the page for scaffold_1097 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

HNRNPUENSTTRG00000005281 (Bottlenosed dolphin)

Gene Details

heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A)

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000004982, Bottlenosed dolphin)

Protein Percentage 60.53%
cDNA percentage 62.07%
Ka/Ks Ratio 0.79978 (Ka = 0.0779, Ks = 0.0974)

HNRNPUENSBTAG00000007606 (Cow)

Gene Details

heterogeneous nuclear ribonucleoprotein U

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000048368, Cow)

Protein Percentage 96.92%
cDNA percentage 95.38%
Ka/Ks Ratio 0.13657 (Ka = 0.02, Ks = 0.1462)

Additional orthologs identified in other species via the OPTIC pipeline.

HNRNPU (Human)   Hnrnpu (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 2685 bp    Location:69456..50560   Strand:-
Raw sequence 
>bmy_15070
ATGAGTTCCTCGCCTGTTAATGTGAAAAAGCTGAAGGTGTCGGAGCTGAAGGAGGAGCTCAAAAAGCGGCGCCTGTCCGACAAGGGCCTCAAGGCCGAGCTCATGGAGCGTCTCCAGGCCGCGCTGGACGACGAGGAGGCCGGGGGCCGCCCCGCCATGGAGCCCGGGAACGGCAGCCTAGACCTGGGCGGGGATTCCGCCGGGCGCTCGGGAGCAGGCCTCGAGCAGGAGGCCGCGGCAGGCGGCGATGACGACGAGGAGGAAGAGGAGGAGGAGGAGGAAGGGATAGCCGCCCTGGATGGCGACCAGATGGAGCTCGGGGAGGAGAACGGCGCCGCGGGGGCGGCCGACTCGGGCCCGATGGAGGAGGAGGAGGCCGCCTCGGAGGACGAGAACGGCGACGACCAGGGCTTCCAGGAAGGGGAGGATGAGCTCGGAGACGAGGAGGAAGCCGCGGGCGACGAGAACGGGCACGGGGAGCAGCAGCCTCAACCGCCGGCGGCGCCGCAGCAACAGCCCCAGCAGCAGCGCGGGGCCGCCAAGGAGGCCGCAGGGAAGAGCAGCGGCCCCACGTCGCTGTTCGCGGTGACGGTGGCGCCGCCCGGGGCGAGGCAGGGCCAGCAGCAGGCGGGAGGAGACGGCAAAACAGAACAGAAAGGCGGAGATAAAAAGAGAGGTGTTAAAAGACCTCGAGAAGATCATGGCCGTGGCTATTTTGAGTACATTGAAGAGAACAAGTATAGCAGAGCCAAATCTCCTCAGCCACCTGTWGAAGAAGAAGATGAGCACTTCGACGACACAGTGGTTTGTCTTGATACTTGCTTCTACGATAAATTGCTTAAATATTGGCGAGATACTGAAGCAATGATTTGGCGAGCAGATACATTTATATTGGATATCAAAAGAAATAATATGGTATTTGATATAATTGCAGATAATTGTGATCTACATTTTAAAATATCAAGAGATCGCCTCAGTGCTTCTTCTCTTACTATGGAGAGTTTTGCTTTTCTTTGGGCTGGAGGAAGGGCATCCTATGGTGTGTCAAAAGGCAAAGTCTGTTTTGAGATGAAGGTTACAGAGAAGATCCCAGTAAGGCATTTATATACAAAAGATATTGACATACACGAAGTTCGGATTGGCTGGTCACTAACCACAAGTGGAATGTTGCTTGGTGAAGAAGAATTTTCTTATGGGTATTCTCTAAAAGGAATAAAAACATGCAACTGTGAGACTGAAGATTATGGAGAGAAGTTTGATGAAAATGATGTGATTACATGTTTTGTTAACTTTGAAAGTGATGAAGTAGAACTCTCCTATGCAAAGAATGGACAAGATCTTGGCATTGCCTTCAAAATCAGTAAGGAAGTTCTTGCTGGACGACCACTCTTCCCGCATGTTCTGTGCCACAACTGTGCGGTTGAGTTTAATTTTGGTCAGAAGGAAAAGCCATATTTTCCAATACCTGAAGACTATACTTTTATCCAGAATGTCCCCTTGGAGGATCGAGTTAGAGGACCAAAGGGGCCTGAAGAGAAGAAAGATTGTGAAGTGGTTATGATGATTGGCTTGCCAGGAGCTGGAAAAACTACCTGGGTTACTAAACATGCAGCAGAAAATCCTGGTAAATACAACATTCTTGGAACAAACACCATAATGGATAAAATGATGGTGGCAGGTTTTAAGAAGCAAATGGCAGATACTGGGAAACTAAACACGCTGTTGCAGAGAGCTCCACAGTGTCTTGGAAAGTTTATTGAGATTGCTGCCCGTAAGAAGCGAAATTTCATTTTGGATCAGACAAATGTGTCTGCTGCTGCCCAGAGGAGAAAAATGTGCCTGTTTGCAGGCTTCCAACGAAAAGCTGTTGTAGTTTGCCCAAAAGATGAAGACTATAAGCAAAGAACACAGAAGAAAGCAGAAGTAGAGGGAAAAGACCTACCGGAACATGCAAAGGAGGAAGCCCAAAAACTTTTGGAGCAATATAAGGAAGAAAGCAAAAAAGCTCTTCCACCGGAAAAGAAACAGAACACAGGCTCAAAGAAGAGCAATAAAAATAAGAGTGGCAAGAACCAGTTTAACAGAGGTGGTGGCCATAGAGGGCGCGGTGGATTCAATATGCGTGCTCCTGGGAATCGTGGTGGATATAATAGGAGGGGCAATATGCCACAGAGAGGTGGTGGCGGTGGCGGAAGTGGTGGAATTGGCTATCCATATCCTCGTGGCCCTGTTTTTCCCAGCCGAGGCGGTTATTCAAACAGAGGGAATTACAACAGAGGTGGAATGCCTAACAGAGGGAACTACAACCAGAACTTCAGAGGACGAGGAAACAATCGTGGCTACAAAAATCAATCTCAGGGCTACAACCAGTGGCAGCAGGGTGTAACAATTCTGGGGTCAGAAGCCATGGAGTCAGCATTATCACCAAGGATATTATTGAATACCCAAATAAAACGAACTGATACATATTTCTCCAAAACCTTCACAAGAAGTCGACTTTTTAAAGTGAATCTTGATCTCGGCTTTGTTCACACCGAAGTGAGTTGTGTCTGGGTTTTCTGTGCTCAAGACGGCTCAATTGCTGCTGCTGCTGCCGCTGTTGGTTTGTTTTCTTTCAGGATCAAGATGACTGTCAGTGGTTGTGAACACATTCTTAAGGTAGCATTTTCAGATGTTATGCCATAG

Related Sequences

bmy_15070T0 SequenceType object (3)

Length: 895 aa      View alignments
>bmy_15070T0
MSSSPVNVKKLKVSELKEELKKRRLSDKGLKAELMERLQAALDDEEAGGRPAMEPGNGSLDLGGDSAGRSGAGLEQEAAAGGDDDEEEEEEEEEGIAALDGDQMELGEENGAAGAADSGPMEEEEAASEDENGDDQGFQEGEDELGDEEEAAGDENGHGEQQPQPPAAPQQQPQQQRGAAKEAAGKSSGPTSLFAVTVAPPGARQGQQQAGGDGKTEQKGGDKKRGVKRPREDHGRGYFEYIEENKYSRAKSPQPPVEEEDEHFDDTVVCLDTCFYDKLLKYWRDTEAMIWRADTFILDIKRNNMVFDIIADNCDLHFKISRDRLSASSLTMESFAFLWAGGRASYGVSKGKVCFEMKVTEKIPVRHLYTKDIDIHEVRIGWSLTTSGMLLGEEEFSYGYSLKGIKTCNCETEDYGEKFDENDVITCFVNFESDEVELSYAKNGQDLGIAFKISKEVLAGRPLFPHVLCHNCAVEFNFGQKEKPYFPIPEDYTFIQNVPLEDRVRGPKGPEEKKDCEVVMMIGLPGAGKTTWVTKHAAENPGKYNILGTNTIMDKMMVAGFKKQMADTGKLNTLLQRAPQCLGKFIEIAARKKRNFILDQTNVSAAAQRRKMCLFAGFQRKAVVVCPKDEDYKQRTQKKAEVEGKDLPEHAKEEAQKLLEQYKEESKKALPPEKKQNTGSKKSNKNKSGKNQFNRGGGHRGRGGFNMRAPGNRGGYNRRGNMPQRGGGGGGSGGIGYPYPRGPVFPSRGGYSNRGNYNRGGMPNRGNYNQNFRGRGNNRGYKNQSQGYNQWQQGVTILGSEAMESALSPRILLNTQIKRTDTYFSKTFTRSRLFKVNLDLGFVHTEVSCVWVFCAQDGSIAAAAAAVGLFSFRIKMTVSGCEHILKVAFSDVMP*