Part of scaffold_1082 (SequenceType object (1))

For more information consult the page for scaffold_1082 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

OGFOD1ENSTTRG00000013546 (Bottlenosed dolphin)

Gene Details

2-oxoglutarate and iron-dependent oxygenase domain containing 1

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000012854, Bottlenosed dolphin)

Protein Percentage 96.92%
cDNA percentage 98.2%
Ka/Ks Ratio 0.59444 (Ka = 0.0152, Ks = 0.0256)

OGFOD1ENSBTAG00000001171 (Cow)

Gene Details

2-oxoglutarate and iron-dependent oxygenase domain-containing protein 1

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000032330, Cow)

Protein Percentage 91.47%
cDNA percentage 92.51%
Ka/Ks Ratio 0.2497 (Ka = 0.0452, Ks = 0.181)

OGFOD1 (Minke Whale)

Gene Details

2-oxoglutarate and iron-dependent oxygenase domain containing 1

External Links

Gene match (Identifier: BACU020086, Minke Whale)

Protein Percentage 98.65%
cDNA percentage 99.1%
Ka/Ks Ratio 0.35299 (Ka = 0.0062, Ks = 0.0175)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence SequenceType object (2)

Length: 1560 bp    Location:536782..556626   Strand:+
>bmy_15084
ATGAGTGGTAAGCGGCCTGCTGAGCCCGTCCCGGGCCGGGCTGGGAAAAGGGGAAAGAAGGAGGTGATGGCGAAGTTTTCGGATGCTGTCACGGAGGAAACCTTGAAAAAGCAGGTGGCTGAGGCCTGGAGTCGCAGGACGCCGTTCCGCCACGAAGCCATTGTCATGGACATGGACCCCTTTCTTCACTGTGTGATCCCAAACTTCATCCAAAGCGAAAACTTCTTGGAAGGACTTCAGAAGGAACTTTTGAACTTGGACTTCCATGAAAAGAAAATTCTGTTTGAACATTTCCGGGCTTGGCTTTCAGACATTTCGAAGATTGACCTGGAATCAACCATTGATGTGTCCTGTGCTAAATATGAATTCTCAGATGCCCTGCTCTGCCATGACGACGAGCTGGAAGGACGCCGGATTGCCTTCATTCTTTACCTGGTTCCTCCCTGGGACAGGAGCTTGGGGGGCACCCTGGACCTGTACAACGTTGACGAACACTTTCAGCCGAAGCAGATTGTCAAGTCTCTTATCCCTTCGTGGAACACACTGGTTTTCTTTGAAGTGTCTCCAGTATCCTTTCACCAGGTTTCCGAAGTCCTGTCTGAAGAAAAGTCGCGTTTGTCCATCAGCGGCTGGTTTCACGGTCCTTCACTGACCAGGCCTCCCACCTACTTTGAACCTCTCATACCTCGGAGCCCTCACATCCCACAAGATCATGAAATTTTGTATGACTGGATCAACCCTACTTATCTCGACATGGAGTACCAAGTTCAAATTCAAGAAGAATTTGAAGAAAGCTCTGAAATTCTCCTAAAAGAGTTCCTTAAGTCTGAGAAATTTGCAGAGGTGTGTGAGGCTTTGGAGAAAGGAGATGTGGAATGGAGCAGCCGAGGTCCCCCTAACAAAAGGTTTTACGAGAAGGCTGAGGAGAGCAAACTTCCCGACATCTTGAAGGACTGCATGGCATTATTTCGCTCCGAGGCAATGTTCTTGCTGCTCTCCAACTTCACAGGCCTGAAACTTCACTTCTTGGCCCCTTCAGAAGAAGGTGAGCTTGAGGACAAAAAAGAGGGAGAAGCAGCCTCTGCTGCTGATGACACTGAAGAAGGGCCTAGCCGCAGTTCTGAGCCAGAGAGCAGGCGGGCGGCCAGCAGCAGCAGCAGTCAGCAGAGCAACGAACAGACGGACCCAGAGCCAGAGGAAAACGATGCAAAGAAAGAATCAGGTGTTCCCACATGCCAGGGGGAACTGAGGCATTGGAAGACTGGTCACTACACTTTAATCCATGACAACAGCAAGACTGAATTTGCCCTGGACTTACTTCTCTACTGTGGCTGTGAAGGCTGGGAGCCAGAGTATGGTGGCTTCACCTCCTACATTGCCAAAGGAGATGATGAAGAGCTGCTAACAGTGAATCCAGAAAACAATTCTTTGGCGTTGGTCTACAGAGATAGAGAGACTCTGAAATTCGTCAAGCATATTAACCACCGAAGCCTAGAACAAAAGAAAACTTTCCCAAACAGAACAGGTTTCTGGGACTTTTCATTTGTCTATTATGAATAA

Related Sequences

bmy_15084T0 SequenceType object (3)

Length: 520 aa      View alignments
>bmy_15084T0
MSGKRPAEPVPGRAGKRGKKEVMAKFSDAVTEETLKKQVAEAWSRRTPFRHEAIVMDMDPFLHCVIPNFIQSENFLEGLQKELLNLDFHEKKILFEHFRAWLSDISKIDLESTIDVSCAKYEFSDALLCHDDELEGRRIAFILYLVPPWDRSLGGTLDLYNVDEHFQPKQIVKSLIPSWNTLVFFEVSPVSFHQVSEVLSEEKSRLSISGWFHGPSLTRPPTYFEPLIPRSPHIPQDHEILYDWINPTYLDMEYQVQIQEEFEESSEILLKEFLKSEKFAEVCEALEKGDVEWSSRGPPNKRFYEKAEESKLPDILKDCMALFRSEAMFLLLSNFTGLKLHFLAPSEEGELEDKKEGEAASAADDTEEGPSRSSEPESRRAASSSSSQQSNEQTDPEPEENDAKKESGVPTCQGELRHWKTGHYTLIHDNSKTEFALDLLLYCGCEGWEPEYGGFTSYIAKGDDEELLTVNPENNSLALVYRDRETLKFVKHINHRSLEQKKTFPNRTGFWDFSFVYYE*