Part of scaffold_1099 (Scaffold)

For more information consult the page for scaffold_1099 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CNTN1 ENSTTRG00000007445 (Bottlenosed dolphin)

Gene Details

contactin 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000007045, Bottlenosed dolphin)

Protein Percentage 85.27%
cDNA percentage 86.37%
Ka/Ks Ratio 0.42463 (Ka = 0.0449, Ks = 0.1057)

CNTN1 ENSBTAG00000020679 (Cow)

Gene Details

contactin-1 precursor

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000042896, Cow)

Protein Percentage 93.78%
cDNA percentage 92.32%
Ka/Ks Ratio 0.15236 (Ka = 0.0374, Ks = 0.2452)

CNTN1  (Minke Whale)

Gene Details

contactin 1

External Links

Gene match (Identifier: BACU002215, Minke Whale)

Protein Percentage 93.93%
cDNA percentage 94.74%
Ka/Ks Ratio 0.38002 (Ka = 0.0399, Ks = 0.1051)

Genome Location

Sequence Coding sequence

Length: 1641 bp    Location:88453..129796   Strand:+
>bmy_15115
TTTACATGGCACAGAAGGTATGGTCATGGAGTTTCTGAGGAAGACAAAGGATTTGGACCAATTTTTGAAGAACAACCAATCAATACCATTTATCCAGAGGAGTCACCGGAAGGAAAAGTTTCACTAAACTGTAGGGCACGAGCCAGCCCTTTCCCAGTTTACAAATGGAGAATGAATAATGGGGATATTGATCTGACAAGTGATCGGTACAGTATGGTAGGAGGAAACCTTGTGATCAACAATCCTGACAAACAGAAAGATGCTGGAGTATATTACTGTTTAGCATCAAATAACTACGGAATGGTCAGAAGCACTGAAGCAACCTTGAGCTTTGGATACAGCAGGGCTATGAAGAAAGCAGGTGTTGGCTTCTTCAGAGATGATGATCTTAGCTACCGCTGGCTTCTAAATGAATTTCCTGTATTTATCACAATGGATAAACGAAGATTTGTGTCTCAGACAAATGGCAATCTCTACATTGCTAATGTTGAGGCATCCGACAAAGGGAATTAYTCCTGCTTTGTATCCAGTCCCTCTATTACAAAGAGTGTGTTCAGCAGATTTATCCCACTCATTCCACTACCTGAACGAACAACAAAACCATATCCTGCTGATATTGTAGTTCAGTTCAAGGACATATATGCATTGATGGGCCAAAATGTGACTTTAGAGTGTTTTGCACTTGGCAATCCTGTTCCTGATATCCGTTGGCGGAAGGTCCTAGAACCAATGCCAAGCACGGCTGAGATCAGCACCTCTGGAGCTGTCCTGAAGATCTTCAATATTCAGCTAGAAGATGAAGGCACATATGAATGTGAGGCTGAGAATATTAGAGGAAAGGATAAACACCAGGCAAGAATTTATGTTCAAGCATTTCCTGAGTGGGTAGAACACATCAATGACACAGAGGTGGATATAGGCAGTGATCTCTACTGGCCTTGTGTGGCCACAGGGAAGCCCATCCCTACCATCCGATGGCTGAAGAATGGATATTCGTATCATAGAGGGGAATTGAGACTGTATGATGTGACCTTTGAAAATGCTGGCATGTATCARTGCATAGCTGAAAATACACATGGAGCCATTTATGCAAACGCGGAGTTGAAGATCTTGGCTTTGGCTCCAACTTTTGAAATGAATCCTATGAAGAAAAAGATCCTGGCTGCTAAAGGAGGAAGAGTTATAATTGAATGCAAACCTAAAGCTGCACCCAAACCAAAATTTTTATGGAGTAAAGGTACAGAGCGGCTTGTCAATAGCAGCAGAATACTCATTTGGGAAGATGGCAGCTTGGAAATCAATAACATTACAAGGAATGATGGAGGTGTCTATACATGCTTTGTAGAAAATAATAAAGGGAAGGCTAATAGCACTGGGACTCTTGTTATCACAGATCCCACACGAATTATACTGGCTCCAATTAATGCCGACATCACTGTTGGAGAAAATGCAACCATGCAGTGTGCTGCTTCCTTCGATCCTGCACTGGATCTCACATTTGTTTGGTCCTTCAATGGCTATGTGATCGACTTTAACAAAGAGAACATTCATTACCAGCGGAATTTTATGGGTTATCTTGAAAATTATGGATCAGACATTGGAGAAATCAAGGTGATTGGCAGTGGAAGGAATCAGAACATG

Related Sequences

bmy_15115T0 Protein

Length: 547 aa      View alignments
>bmy_15115T0
FTWHRRYGHGVSEEDKGFGPIFEEQPINTIYPEESPEGKVSLNCRARASPFPVYKWRMNNGDIDLTSDRYSMVGGNLVINNPDKQKDAGVYYCLASNNYGMVRSTEATLSFGYSRAMKKAGVGFFRDDDLSYRWLLNEFPVFITMDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSPSITKSVFSRFIPLIPLPERTTKPYPADIVVQFKDIYALMGQNVTLECFALGNPVPDIRWRKVLEPMPSTAEISTSGAVLKIFNIQLEDEGTYECEAENIRGKDKHQARIYVQAFPEWVEHINDTEVDIGSDLYWPCVATGKPIPTIRWLKNGYSYHRGELRLYDVTFENAGMYQCIAENTHGAIYANAELKILALAPTFEMNPMKKKILAAKGGRVIIECKPKAAPKPKFLWSKGTERLVNSSRILIWEDGSLEINNITRNDGGVYTCFVENNKGKANSTGTLVITDPTRIILAPINADITVGENATMQCAASFDPALDLTFVWSFNGYVIDFNKENIHYQRNFMGYLENYGSDIGEIKVIGSGRNQNM