Part of scaffold_1101 (Scaffold)

For more information consult the page for scaffold_1101 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

LRP8 ENSTTRG00000001036 (Bottlenosed dolphin)

Gene Details

low density lipoprotein receptor-related protein 8, apolipoprotein e receptor

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000000974, Bottlenosed dolphin)

Protein Percentage 85.08%
cDNA percentage 87.85%
Ka/Ks Ratio 0.36904 (Ka = 0.1028, Ks = 0.2785)

LRP8 ENSBTAG00000000736 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000050885, Cow)

Protein Percentage 77.86%
cDNA percentage 80.89%
Ka/Ks Ratio 0.33369 (Ka = 0.1685, Ks = 0.5048)

LRP8  (Minke Whale)

Gene Details

low density lipoprotein receptor-related protein 8, apolipoprotein e receptor

External Links

Gene match (Identifier: BACU018429, Minke Whale)

Protein Percentage 86.08%
cDNA percentage 88.52%
Ka/Ks Ratio 0.41639 (Ka = 0.1008, Ks = 0.2421)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 2115 bp    Location:344144..372332   Strand:+
>bmy_15162
CTGGGCACCTGCCGTGGAGACGAGTTCCAGTGTGGGGATGGGACTTGTGTCCCTGCCATCAAGCGCTGCAACCAGGAACAGGACTGTCCAGACAGGAGTGATGAAGCTGGCTGCCTGCAGGAGTCAACATGTGAGGGTCCCCGCAGATTTCAGTGTAAGAGTGGCGAGTGCGTGGACGGCGGGAAAGTGTGTGATGCTCAGAGGGACTGCCGGGACTGGTCAGATGAGCCTCTGAAAGAGTGTGGGCTGAACGAGTGTCTGCACAACAATGGCGGCTGTTCCCACATCTGCACCGACCTCAAGATCGGCTTTGAGTGCACGTGCCCATCGGGCTACCGGCTCCTGGACCAGAAGACCTGTGGTGACATTGACGAGTGTGAGGACCCAGACGCCTGCAGCCAGATCTGTGTCAATTACAAGGGCTACTTTAAGTGCGAGTGCCACCCTGGCTACGAGATGGACACCCTGACCAAGAACTGCAAGGCCGTCGCTGGCAGAAGCCCGTCCCTAATCTTCACCAACCGGCACGAAGTGCGGAGGATAGACCTGGTGAAGCGGGACTACTCGCGTCTCATCCCCATGCTCAAGAACGTCGTGGCGCTGGACGTCGAAGTTGCCACCAATCGCATCTACTGGTGTGACCTCTCCTACCGCAAGATCTACAGCGCCTACATGGACAAAGCCAGCGACCCGACAGAGCAGGAGGTCCTCATTGATGAGCAGCTGCACTCTCCAGAGGGCCTGGCAGTGGACTGGGTCCACAAGCACATCTACTGGACCGACTCGGGCAACAAGACCATCTCAGTGGCCACAGTTGATGGCGGACGCCGCTGCACTCTCTTCAGCCGTGACCTCAGTGAACCCCGGGCCATTGCCGTCGACCCCCTGCGAGGGTTCGTGTATTGGTCTGACTGGGGGTACGAGGCTAAGATCGAGAAGTCTGGGCTCAACGGTATGCACCGGCAGACACTGGTGTCAGACGGTATTGAGTGGCCCAACGGAATCACCCTGGATTTGCTGAGCCAGCGCTTGTACTGGGTGGACTCCAAGCTGCACCAGCTGTCCAGCATTGACTTCAGCGGAGGCAACAGGAAGATGCTGATTTCCTCCCCTGACTTCCTGAGCCACCCTTTCGGGATAGCTGTRTTTGAGGACAAGGTGTTCTGGACAGACCTGGAGAATGAGGCCATTTTCAGTGCAAATCGGCTCAATGGCCTGGAAATCTCCGTCCTAGCTGAGAACCTCAATAACCCACATGACATTGTCATCTTCCATGAGCTGAAACAGCCAAGAGCTGCAGATGCCTGCGAGCTGAGTGCCCAGCCCAATGGAGGCTGTGAGTACCTGTGCCTTCCTGCTCCTCAGATCTCCAGCCACTCCCCCAAGTACACTTGTGCCTGTCCTGACACAATGCGACTGGGCCCTGACATGAAGAGGTGCTACCGAGCACCTCAGTCTACCTCAACTACGACGTTAGCCTCCACCACGACGAGGACAGTAGCCGACACCACCAGAGCCCCTGGGACCACCGTCCGCAGCCCCGCCTACCAGAACCACAGCACAGAGACACCGAGCCTGGCAGCAGCGGTCCCAAGCTCAGTTAGTGTTCCCAGGGCTCCCAGCATCAGCCCGTCTACCCCACGCCCTGCAACCAGCAACCACTCCCAGCACTATGGGAATGAAAGTGGCAAGATGGGCTCAACGGTCACTGCTGCTGTCATTGGGATCATTGTGCCTATGGTGGTTATAGCCCTGCTGTGCATGAGTGGCTACCTGATCTGGAGAAACTGGAAGCGGAAGAACACCAAAAGCATGAATTTCGACAACCCCGTATACAGGAAAACGACAGAAGAAGAGGATGAGGATGAGCTCCACATAGGGAGGGCTGCTCAGATTGGCCATGTCTATCCAGCAAATGATTATGCTTTGTGGCTATCCATCATCATAAATTATTTATTAACATATTTCAAAAGTAAGATTAGTTCTATAAGTAATTTAGAGAGTCCACAAGAAGGGTTATCTGTAGTTTTCAGAGAAGCCTTTGGAAATTTGGATCAGAAAAGAGATACCATGGACACTTGGGTTGAATTCACTGTTTCCTCTGAAGCACACTGA

Related Sequences

bmy_15162T0 Protein

Length: 705 aa      View alignments
>bmy_15162T0
LGTCRGDEFQCGDGTCVPAIKRCNQEQDCPDRSDEAGCLQESTCEGPRRFQCKSGECVDGGKVCDAQRDCRDWSDEPLKECGLNECLHNNGGCSHICTDLKIGFECTCPSGYRLLDQKTCGDIDECEDPDACSQICVNYKGYFKCECHPGYEMDTLTKNCKAVAGRSPSLIFTNRHEVRRIDLVKRDYSRLIPMLKNVVALDVEVATNRIYWCDLSYRKIYSAYMDKASDPTEQEVLIDEQLHSPEGLAVDWVHKHIYWTDSGNKTISVATVDGGRRCTLFSRDLSEPRAIAVDPLRGFVYWSDWGYEAKIEKSGLNGMHRQTLVSDGIEWPNGITLDLLSQRLYWVDSKLHQLSSIDFSGGNRKMLISSPDFLSHPFGIAVFEDKVFWTDLENEAIFSANRLNGLEISVLAENLNNPHDIVIFHELKQPRAADACELSAQPNGGCEYLCLPAPQISSHSPKYTCACPDTMRLGPDMKRCYRAPQSTSTTTLASTTTRTVADTTRAPGTTVRSPAYQNHSTETPSLAAAVPSSVSVPRAPSISPSTPRPATSNHSQHYGNESGKMGSTVTAAVIGIIVPMVVIALLCMSGYLIWRNWKRKNTKSMNFDNPVYRKTTEEEDEDELHIGRAAQIGHVYPANDYALWLSIIINYLLTYFKSKISSISNLESPQEGLSVVFREAFGNLDQKRDTMDTWVEFTVSSEAH*