Part of scaffold_1101 (Scaffold)

For more information consult the page for scaffold_1101 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CPT2 ENSTTRG00000001033 (Bottlenosed dolphin)

Gene Details

carnitine palmitoyltransferase 2

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000000971, Bottlenosed dolphin)

Protein Percentage 88.93%
cDNA percentage 91.42%
Ka/Ks Ratio 0.56014 (Ka = 0.0785, Ks = 0.1402)

CPT2 ENSBTAG00000014649 (Cow)

Gene Details

carnitine O-palmitoyltransferase 2, mitochondrial precursor

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000019505, Cow)

Protein Percentage 83.06%
cDNA percentage 86.43%
Ka/Ks Ratio 0.3718 (Ka = 0.1112, Ks = 0.2991)

CPT2  (Minke Whale)

Gene Details

carnitine palmitoyltransferase 2

External Links

Gene match (Identifier: BACU000255, Minke Whale)

Protein Percentage 90.07%
cDNA percentage 91.97%
Ka/Ks Ratio 0.53169 (Ka = 0.0721, Ks = 0.1356)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1845 bp    Location:426804..405700   Strand:-
>bmy_15165
ATGTCCCTACGGTATCAAAACAAAGTCTTGAGAAAGTATGCCTCACGACATAGCCCTGGTGTTTTCATTTCACTGTGGACCTGTAACTTCATCGCCATAGCTGTCATTGGGAATCCACCGGTAGAGAATGATGAGCTGCCTATTCCCAAACTTGAAGACACCACTAGGAGATACCTCAGTGCGCAGAAGCCTCTCTTGGATGATGGCCAGTTCAGGCTAGCTGGTACCAGTCATTTACAGAGGGCATGTGCTCTTGGTCCCTGGTTTGATATGTACTTAACTGCCCGAGACCCCATTGTCCTGAACTTTAATCCATTTATGTCATTCAACCCTGACCCAAAGTCCGAGTACAACGACCAGCTCACCCGGGCAACCAACATGACTGTCTCTGCCGTCCGGTTTCTGAAGACACTTCGGGCTGACCTTTTGGAACCAGAAGTGTTCCACTTGAACCCTGCCAAAAGTGACACTGATACCTTCAAGAGACTCATACGCTTTGTGCCTTCCTCTCTGTCCTGGTATGGCGCCTATTTGGTCAATGCATATCCCCTGGATATGTCCCAGTATTTTCGGCTTTTCAATTCCACTCGTTTACCCAAACCCAGTCGAGATGAACTCTTCACTGATGACAAGGCCAGACACCTCCTGGTCCTAAGAAAAGGACATTTCTATGTCTTTGATGTCCTGGATCAAGATGGGAACATTGTGAGCGCCTCAGAAATCCAGGCTCATCTGAAGTACATTCTCTCAGACGATAGCCTGGCCCCCGAGTTTCCACTGTCATATCTGACCAGTGAGAACCGGGACATCTGGGCAGAGCTCAGACAGAAGCTGGTGAGTGGTGGCAATGAGGAGGCCCTGAGGAAAGTGGACTCTGCTGTATTCTGTCTCTGCCTAGATGACTTCCCCATTAAGGACCTTGTCCACTTGTCCCACAACATGCTGCACGGTGACGGCACAAACCGCTGGTTTGATAAATCCTTTAACCTCATTATAGCCAAGGATGGCACTGCTGCTGTCCACTTTGAGCATGCTTGGGGCGATGGTGTTGCAGTGCTCAGGTTTTTTAATGAAGTGTTTAAAGACAGCACTCAGGCCCCTGCTGTCACTCCACGGAGCCAGCCAGCTAACACTGACTCTTCTGTCGCCGTACAGAAACTCAACTTCAAGCTGAACGAYGCTTTAAAGACTGGCATTAGTGCTGCTAAGGAAAAATTTGATGCCACCATGAAAACCCTCACCATTGACTACATCCAGTTTCAGAGAGGAGGCAAAGAATTCCTGAAGAAGCAGAAGCTGAGCCCTGACTCGGTGGCTCAGCTGGGCTTCCAGATGGCCTTCCTGCAGCAGTACGGGCAGACAGTGGCCACCTATGAGTCCTGTAGCACTGCAGCGTTCAAGCACGGCCGCACCGAGACCATCCGCCCGGCCTCCATCTTCACAAAGAGGTGCTCTGAGGCCTTTGTCAGGGAGCCCTCCAAGCACAGCGCTGGAGAGCTTCAGCAGATGATGGCCAGGTGCTCCACGTACCACAACCAGCTGACCAAAGAAGCAGCGATGGCCAAAGGGATTGACCTGCCCGAGCTATACCTTGACCCTGCATATAGGCAGATAAACCACAACATCCTGTCCACGAGCACGTTGAGCAGCCCAGCAGTGAACATCGGCGGCTTTGCCCCCGTGGTCCCTGATGGTTTTGGCATTGCGTATGCTGTTCATGACAACTGGATAGGCTGCAACGTCTCTGCCTACCAAGGCCGCAATGCCCATGAGTTTCTCCAGTGTGTGGAGAAGGCCTTAGAAAGCATGTTTGATGCCTTAGAAGGCAAAGCCATCAAATCTTAA

Related Sequences

bmy_15165T0 Protein

Length: 615 aa      View alignments
>bmy_15165T0
MSLRYQNKVLRKYASRHSPGVFISLWTCNFIAIAVIGNPPVENDELPIPKLEDTTRRYLSAQKPLLDDGQFRLAGTSHLQRACALGPWFDMYLTARDPIVLNFNPFMSFNPDPKSEYNDQLTRATNMTVSAVRFLKTLRADLLEPEVFHLNPAKSDTDTFKRLIRFVPSSLSWYGAYLVNAYPLDMSQYFRLFNSTRLPKPSRDELFTDDKARHLLVLRKGHFYVFDVLDQDGNIVSASEIQAHLKYILSDDSLAPEFPLSYLTSENRDIWAELRQKLVSGGNEEALRKVDSAVFCLCLDDFPIKDLVHLSHNMLHGDGTNRWFDKSFNLIIAKDGTAAVHFEHAWGDGVAVLRFFNEVFKDSTQAPAVTPRSQPANTDSSVAVQKLNFKLNDALKTGISAAKEKFDATMKTLTIDYIQFQRGGKEFLKKQKLSPDSVAQLGFQMAFLQQYGQTVATYESCSTAAFKHGRTETIRPASIFTKRCSEAFVREPSKHSAGELQQMMARCSTYHNQLTKEAAMAKGIDLPELYLDPAYRQINHNILSTSTLSSPAVNIGGFAPVVPDGFGIAYAVHDNWIGCNVSAYQGRNAHEFLQCVEKALESMFDALEGKAIKS*