Part of scaffold_1101 (Scaffold)

For more information consult the page for scaffold_1101 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SLC1A7 ENSTTRG00000007872 (Bottlenosed dolphin)

Gene Details

solute carrier family 1 (glutamate transporter), member 7

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000007444, Bottlenosed dolphin)

Protein Percentage 89.12%
cDNA percentage 89.05%
Ka/Ks Ratio 0.0899 (Ka = 0.0074, Ks = 0.0824)

SLC1A7 ENSBTAG00000012516 (Cow)

Gene Details

excitatory amino acid transporter 5

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000016615, Cow)

Protein Percentage 96.51%
cDNA percentage 94.18%
Ka/Ks Ratio 0.04183 (Ka = 0.0145, Ks = 0.3473)

SLC1A7  (Minke Whale)

Gene Details

solute carrier family 1 (glutamate transporter), member 7

External Links

Gene match (Identifier: BACU000256, Minke Whale)

Protein Percentage 99.59%
cDNA percentage 98.77%
Ka/Ks Ratio 0.02507 (Ka = 0.0017, Ks = 0.067)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1515 bp    Location:509701..530932   Strand:+
>bmy_15166
ATGTCCGGCCTCGCCTCCCTGGATGCCAAGACCTCCAGCCGCCTGGGCATCCTCACTGTAGCGTACTACCTGTGGACCACCTTCGTGGCAGTCATCGTGGGCATCGTAATGGTCTCCATCATCCACCCGGGAAGCGCAGCCCAGAAGGAGACGACGGAGCATAGTGGGAAGCCCATCATGAGCTCAGCAGACCCCCTGCTGGACCTCATTCGGAACATGTTCCCAGCCAACCTGGTGGAAGCCACATTCAAACAGTACCGCACCAAGACCACCCCCGTTGTGAAGTCCCCCAAGGTGGCACCGGAGGAGGCCCCTCCTCGGCGGATCCTCATCTATGGGGTCCAGGAGGAGAATGGCTCTCGTGTGCAGAACTTCGCCCTGGACCTGACCCCACCGCCCGAGGTCATTTACAAGTCGGAGCCTGGCACCAGCGATGGCATGAACGTGCTGGGCATCGTCATCTTCTCTGCCACCATGGGCATCATGCTGGGCCGTATGGGTGACAGCGGGGCCCCCCTGGTCAGCTTCTGCCAGTGCCTCAATGAGTCCGTCATGAAGATCGTGGCAGTGGCTGTGTGGTACTTCCCCTTTGGCATCGTGTTCCTCATCGCTGGCAAGATCCTGGAGATGGACAACCCCACGACCGTGGGAAAGAAGCTGGGCTTCTACGCTGCCACCGTGGTGTGCGGGCTGGTGGTGCATGGCCTCTTCATCCTGCCCCTGCTCTACTTTTTCATCACCAAAAAGAACCCCATCGTCTTCATCCGCGGCATTCTCCAGGCCCTGCTCATCGCGCTGGCCACCTCCTCCAGCTCAGCCACACTGCCAATCACCTTCAAGTGCCTGCTGGAGAACAACCACATCGACCGGCGCATTGCCCGCTTCGTGCTGCCCGTGGGCGCCACCATCAACATGGATGGCACCGCACTCTACGAGGCTGTGGCCGCCATCTTCATTGCCCAGGTCAACAACTATGAGCTGGACTTCGGCCAGATCATCACCATCAGCATCACAGCCACCGCAGCCAGCATCGGGGCAGCTGGCATCCCCCAGGCCGGGCTCGTCACCATGGTCATCGTGCTCACCTCCGTGGGACTTCCCACTGATGACATCACCCTCATCATCGCTGTCGACTGGGCTCTCTCCCCTTACAGCAGAGGGCCTGCCGCTCACTGCCCACCTTGGCCCACCAGGGACCGTTTCCGCACCATGATTAACGTGCTGGGTGATGCACTGGCCGCCGGGATCATGGCTCATGTCTGCCGGAAGGACTTCGCTCAGGACACGGGCACCGAGAAACTGCCGCCCTGCGAGACCAAGCCAGTGAGCCTCCAGGAGATCGTGGCGACCCAGCAGAATGGCTGTGTGAAGAGCGTGGCTGAGGCCTCAGAGCTGACCCTGGGCCCCACCTGTCCCCACCACGTCCCCATCCAGGTGGAGCAGGATGAGGAGCCAGCTGCTGCCAGCCTGGACCACTGCACCATTGAGATCAGTGAGCTTGAGACCAACGTCTGA

Related Sequences

bmy_15166T0 Protein

Length: 505 aa      View alignments
>bmy_15166T0
MSGLASLDAKTSSRLGILTVAYYLWTTFVAVIVGIVMVSIIHPGSAAQKETTEHSGKPIMSSADPLLDLIRNMFPANLVEATFKQYRTKTTPVVKSPKVAPEEAPPRRILIYGVQEENGSRVQNFALDLTPPPEVIYKSEPGTSDGMNVLGIVIFSATMGIMLGRMGDSGAPLVSFCQCLNESVMKIVAVAVWYFPFGIVFLIAGKILEMDNPTTVGKKLGFYAATVVCGLVVHGLFILPLLYFFITKKNPIVFIRGILQALLIALATSSSSATLPITFKCLLENNHIDRRIARFVLPVGATINMDGTALYEAVAAIFIAQVNNYELDFGQIITISITATAASIGAAGIPQAGLVTMVIVLTSVGLPTDDITLIIAVDWALSPYSRGPAAHCPPWPTRDRFRTMINVLGDALAAGIMAHVCRKDFAQDTGTEKLPPCETKPVSLQEIVATQQNGCVKSVAEASELTLGPTCPHHVPIQVEQDEEPAAASLDHCTIEISELETNV*