Sequence detailsbmy_15166 (Coding sequence)

Part of scaffold_1101 (SequenceType object (1))

For more information consult the page for scaffold_1101 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SLC1A7ENSTTRG00000007872 (Bottlenosed dolphin)

Gene Details

solute carrier family 1 (glutamate transporter), member 7

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000007444, Bottlenosed dolphin)

Protein Percentage 89.12%
cDNA percentage 89.05%
Ka/Ks Ratio 0.0899 (Ka = 0.0074, Ks = 0.0824)

SLC1A7ENSBTAG00000012516 (Cow)

Gene Details

excitatory amino acid transporter 5

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000016615, Cow)

Protein Percentage 96.51%
cDNA percentage 94.18%
Ka/Ks Ratio 0.04183 (Ka = 0.0145, Ks = 0.3473)

SLC1A7 (Minke Whale)

Gene Details

solute carrier family 1 (glutamate transporter), member 7

External Links

Gene match (Identifier: BACU000256, Minke Whale)

Protein Percentage 99.59%
cDNA percentage 98.77%
Ka/Ks Ratio 0.02507 (Ka = 0.0017, Ks = 0.067)

Additional orthologs identified in other species via the OPTIC pipeline.

SLC1A7 (Human)   Slc1a7 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1515 bp    Location:509701..530932   Strand:+
Raw sequence 
>bmy_15166
ATGTCCGGCCTCGCCTCCCTGGATGCCAAGACCTCCAGCCGCCTGGGCATCCTCACTGTAGCGTACTACCTGTGGACCACCTTCGTGGCAGTCATCGTGGGCATCGTAATGGTCTCCATCATCCACCCGGGAAGCGCAGCCCAGAAGGAGACGACGGAGCATAGTGGGAAGCCCATCATGAGCTCAGCAGACCCCCTGCTGGACCTCATTCGGAACATGTTCCCAGCCAACCTGGTGGAAGCCACATTCAAACAGTACCGCACCAAGACCACCCCCGTTGTGAAGTCCCCCAAGGTGGCACCGGAGGAGGCCCCTCCTCGGCGGATCCTCATCTATGGGGTCCAGGAGGAGAATGGCTCTCGTGTGCAGAACTTCGCCCTGGACCTGACCCCACCGCCCGAGGTCATTTACAAGTCGGAGCCTGGCACCAGCGATGGCATGAACGTGCTGGGCATCGTCATCTTCTCTGCCACCATGGGCATCATGCTGGGCCGTATGGGTGACAGCGGGGCCCCCCTGGTCAGCTTCTGCCAGTGCCTCAATGAGTCCGTCATGAAGATCGTGGCAGTGGCTGTGTGGTACTTCCCCTTTGGCATCGTGTTCCTCATCGCTGGCAAGATCCTGGAGATGGACAACCCCACGACCGTGGGAAAGAAGCTGGGCTTCTACGCTGCCACCGTGGTGTGCGGGCTGGTGGTGCATGGCCTCTTCATCCTGCCCCTGCTCTACTTTTTCATCACCAAAAAGAACCCCATCGTCTTCATCCGCGGCATTCTCCAGGCCCTGCTCATCGCGCTGGCCACCTCCTCCAGCTCAGCCACACTGCCAATCACCTTCAAGTGCCTGCTGGAGAACAACCACATCGACCGGCGCATTGCCCGCTTCGTGCTGCCCGTGGGCGCCACCATCAACATGGATGGCACCGCACTCTACGAGGCTGTGGCCGCCATCTTCATTGCCCAGGTCAACAACTATGAGCTGGACTTCGGCCAGATCATCACCATCAGCATCACAGCCACCGCAGCCAGCATCGGGGCAGCTGGCATCCCCCAGGCCGGGCTCGTCACCATGGTCATCGTGCTCACCTCCGTGGGACTTCCCACTGATGACATCACCCTCATCATCGCTGTCGACTGGGCTCTCTCCCCTTACAGCAGAGGGCCTGCCGCTCACTGCCCACCTTGGCCCACCAGGGACCGTTTCCGCACCATGATTAACGTGCTGGGTGATGCACTGGCCGCCGGGATCATGGCTCATGTCTGCCGGAAGGACTTCGCTCAGGACACGGGCACCGAGAAACTGCCGCCCTGCGAGACCAAGCCAGTGAGCCTCCAGGAGATCGTGGCGACCCAGCAGAATGGCTGTGTGAAGAGCGTGGCTGAGGCCTCAGAGCTGACCCTGGGCCCCACCTGTCCCCACCACGTCCCCATCCAGGTGGAGCAGGATGAGGAGCCAGCTGCTGCCAGCCTGGACCACTGCACCATTGAGATCAGTGAGCTTGAGACCAACGTCTGA

Related Sequences

bmy_15166T0 SequenceType object (3)

Length: 505 aa      View alignments
>bmy_15166T0
MSGLASLDAKTSSRLGILTVAYYLWTTFVAVIVGIVMVSIIHPGSAAQKETTEHSGKPIMSSADPLLDLIRNMFPANLVEATFKQYRTKTTPVVKSPKVAPEEAPPRRILIYGVQEENGSRVQNFALDLTPPPEVIYKSEPGTSDGMNVLGIVIFSATMGIMLGRMGDSGAPLVSFCQCLNESVMKIVAVAVWYFPFGIVFLIAGKILEMDNPTTVGKKLGFYAATVVCGLVVHGLFILPLLYFFITKKNPIVFIRGILQALLIALATSSSSATLPITFKCLLENNHIDRRIARFVLPVGATINMDGTALYEAVAAIFIAQVNNYELDFGQIITISITATAASIGAAGIPQAGLVTMVIVLTSVGLPTDDITLIIAVDWALSPYSRGPAAHCPPWPTRDRFRTMINVLGDALAAGIMAHVCRKDFAQDTGTEKLPPCETKPVSLQEIVATQQNGCVKSVAEASELTLGPTCPHHVPIQVEQDEEPAAASLDHCTIEISELETNV*